ggKbase home page

anamox1_curated_scaffold_2491

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2491_1
Gallibacterium anatis, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Arylsulfatase Tax=Gallibacterium anatis (strain UMN179) RepID=F4HD42_GALAU
Arylsulfatase {ECO:0000313|EMBL:KGQ41396.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Gallibacterium.;" source="Gallibacterium anatis IPDH697-78.;"
arylsulfatase
anamox1_curated_scaffold_2491_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(567..1070)
DNA (504bp) protein (168aa)
UPI000299DBAA related cluster Tax=unknown RepID=UPI000299DBAA bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NUDIX hydrolase
Tax=RBG_16_RIF_WS3X_71_46_curated
anamox1_curated_scaffold_2491_3
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1230..2888)
DNA (1659bp) protein (553aa)
aroD_aroE; 3-dehydroquinate dehydratase/shikimate dehydrogenase (EC:1.1.1.25 4.2.1.10)
3-dehydroquinate dehydratase/shikimate dehydrogenase {ECO:0000313|EMBL:BAM02710.1}; EC=1.1.1.25 {ECO:0000313|EMBL:BAM02710.1};; EC=4.2.1.10 {ECO:0000313|EMBL:BAM02710.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
3-dehydroquinate dehydratase/shikimate dehydrogenase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBS2_PHYMF
anamox1_curated_scaffold_2491_4
unknown

Not on your lists

comp(2945..3655)
DNA (711bp) protein (237aa)

This feature has no annotations

anamox1_curated_scaffold_2491_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3752..4273)
DNA (522bp) protein (174aa)
Rieske Fe-S protein (EC:1.10.2.-)
Rieske Fe-S protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI71_CHLTF
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_2491_6
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4411..5538
DNA (1128bp) protein (376aa)
ABC-type antimicrobial peptide transport system, permease component Tax=Methylomicrobium album BG8 RepID=H8GNQ2_METAL
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:EIC30808.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
putative ABC transporter permease
anamox1_curated_scaffold_2491_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5535..6344
DNA (810bp) protein (270aa)
ABC-type antimicrobial peptide transport system, ATPase component Tax=Rhodanobacter denitrificans RepID=M4NEJ5_9GAMM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG88367.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
anamox1_curated_scaffold_2491_8
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6377..7420
DNA (1044bp) protein (348aa)
secretion protein HlyD Tax=Schlesneria paludicola RepID=UPI00029AAA17
Hypothetical conserved protein {ECO:0000313|EMBL:BAL54023.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
secretion protein HlyD
anamox1_curated_scaffold_2491_9
unknown

Not on your lists

7590..8645
DNA (1056bp) protein (352aa)

This feature has no annotations

anamox1_curated_scaffold_2491_10
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8744..10333
DNA (1590bp) protein (530aa)
dac; putative D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAM04782.1}; EC=3.4.16.4 {ECO:0000313|EMBL:BAM04782.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Putative D-alanyl-D-alanine carboxypeptidase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHP4_PHYMF
anamox1_curated_scaffold_2491_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10350..11222)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B34D4D
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_2491_12
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11659..11769
DNA (111bp) protein (37aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX33_ROSS1
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:ABQ91186.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
anamox1_curated_scaffold_2491_13
unknown

Not on your lists

comp(11776..12663)
DNA (888bp) protein (296aa)

This feature has no annotations

anamox1_curated_scaffold_2491_14
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12873..13859
DNA (987bp) protein (329aa)
Phosphate ABC transporter periplasmic phosphate-binding protein Tax=Rhodopirellula sallentina SM41 RepID=M5U5E8_9PLAN
Phosphate ABC transporter periplasmic phosphate-binding protein {ECO:0000313|EMBL:EMI53086.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
phosphate ABC transporter substrate-binding protein, phot family
anamox1_curated_scaffold_2491_15
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13988..16747
DNA (2760bp) protein (920aa)
Phosphate ABC transporter, permease protein Tax=Rhodopirellula sallentina SM41 RepID=M5TV87_9PLAN
Phosphate ABC transporter, permease protein {ECO:0000313|EMBL:EMI53085.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
ABC-type uncharacterized transport system, permease component
anamox1_curated_scaffold_2491_16
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16744..18567
DNA (1824bp) protein (608aa)
Phosphate transport system permease protein PstA Tax=Rhodopirellula sallentina SM41 RepID=M5TVK0_9PLAN
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:EMI53084.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
phosphate ABC transporter membrane protein PstA
anamox1_curated_scaffold_2491_17
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18612..19562
DNA (951bp) protein (317aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
ATP-binding component of ABC phosphate transporter Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ49_9PLAN
phosphate ABC transporter ATPase
anamox1_curated_scaffold_2491_18
unknown

Not on your lists

19635..19916
DNA (282bp) protein (94aa)

This feature has no annotations

anamox1_curated_scaffold_2491_19
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

19947..20636
DNA (690bp) protein (230aa)
Phosphate uptake regulator, PhoU bin=GWF2_Planctomycetes_50_10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
PhoU family transcriptional regulator
Tax=RBG_16_Zixibacteria_53_22_curated
anamox1_curated_scaffold_2491_20
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20724..21107)
DNA (384bp) protein (128aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_50_10_curated
anamox1_curated_scaffold_2491_21
unknown

Not on your lists

comp(21196..21534)
DNA (339bp) protein (113aa)

This feature has no annotations

anamox1_curated_scaffold_2491_22
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21632..23296
DNA (1665bp) protein (555aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UGI6_SPIAZ
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
anamox1_curated_scaffold_2491_23
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23323..24138
DNA (816bp) protein (272aa)
Sodium/myo-inositol cotransporter Tax=Glaciecola psychrophila 170 RepID=K6ZPX4_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH44457.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola psychrophila 170.;"
anamox1_curated_scaffold_2491_trna_1
unknown

Not on your lists

24231..24302
DNA (72bp)
transferRNA Gly
anamox1_curated_scaffold_2491_24
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24535..24651)
DNA (117bp) protein (39aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UX33_ROSS1
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:ABQ91186.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Displaying 25 items

View Taxonomy