ggKbase home page

anamox1_curated_scaffold_3125

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3125_1
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..113
DNA (111bp) protein (37aa)
Phenylalanine--tRNA ligase alpha subunit bin=GWF2_Planctomycetes_42_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
anamox1_curated_scaffold_3125_2
uncultured Planctomycetales bacterium HF0500_02G17, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

124..1074
DNA (951bp) protein (317aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured Planctomycetales bacterium HF0500_02G17.;"
Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase Tax=uncultured Planctomycetales bacterium HF0500_02G17 RepID=E7C4N7_9BACT
phosphoribosylaminoimidazole-succinocarboxamide synthase
anamox1_curated_scaffold_3125_3
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1118..2266
DNA (1149bp) protein (383aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
tRNA-specific 2-thiouridylase MnmA Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IAG5_PHYMF
anamox1_curated_scaffold_3125_4
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists


2344..2571
DNA (228bp) protein (76aa)
50S ribosomal protein L35 Tax=Synergistes sp. 3_1_syn1 RepID=G9PYG3_9BACT
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
anamox1_curated_scaffold_3125_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


2704..3075
DNA (372bp) protein (124aa)
50S ribosomal protein L20 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBA8_PHYMF
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_3125_6
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3300..4097
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBG8_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02606.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_3125_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4332..5183
DNA (852bp) protein (284aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774BBE
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KGM31215.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
phytanoyl-coA dioxygenase
anamox1_curated_scaffold_3125_8
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5248..5979
DNA (732bp) protein (244aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
putative sugar nucleotide epimerase/dehydratase
Tax=GWC2_Planctomycetes_45_44_curated
anamox1_curated_scaffold_3125_9
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5998..6861)
DNA (864bp) protein (288aa)
folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD Tax=Streptomyces sp. C RepID=D9VQE2_9ACTO
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
anamox1_curated_scaffold_3125_10
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

6948..8243
DNA (1296bp) protein (432aa)
CinA-like protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFP7_PHYMF
CinA-like protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
anamox1_curated_scaffold_3125_11
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8291..9049
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFP8_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM04086.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_3125_12
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(9063..9929)
DNA (867bp) protein (289aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE83672.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
anamox1_curated_scaffold_3125_13
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

10029..10640
DNA (612bp) protein (204aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
Displaying 13 items

View Taxonomy