ggKbase home page

anamox1_curated_scaffold_1982

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1982_1
unknown

Not on your lists

comp(2..853)
DNA (852bp) protein (284aa)

This feature has no annotations

anamox1_curated_scaffold_1982_2
Pantoea sp. PSNIH1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1137..2018
DNA (882bp) protein (294aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI00037A54AD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIX51065.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH1.;"
anamox1_curated_scaffold_1982_3
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2102..2896
DNA (795bp) protein (265aa)
sulfotransferase Tax=Pseudomonas sp. 45MFCol3.1 RepID=UPI000369AAA9
sulfotransferase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
anamox1_curated_scaffold_1982_4
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2924..3751
DNA (828bp) protein (276aa)
Sulfotransferase Tax=Synechococcus phage S-SKS1 RepID=M4QPS9_9CAUD
sulfotransferase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
anamox1_curated_scaffold_1982_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3868..5379
DNA (1512bp) protein (504aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Argininosuccinate lyase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IF45_PHYMF
anamox1_curated_scaffold_1982_6
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5416..7164
DNA (1749bp) protein (583aa)
putative two-component system sensor histidine kinase (EC:2.7.13.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Putative two-component system sensor histidine kinase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IF44_PHYMF
anamox1_curated_scaffold_1982_7
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7219..8703
DNA (1485bp) protein (495aa)
Nucleoside-diphosphate-sugar epimerase Tax=Rhodopirellula sallentina SM41 RepID=M5U4C9_9PLAN
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EMI56305.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
oxidoreductase-NAD-dependent nucleoside-diphosphate-sugar epimerase
anamox1_curated_scaffold_1982_8
unknown

Not on your lists

8741..9313
DNA (573bp) protein (191aa)

This feature has no annotations

anamox1_curated_scaffold_1982_trna_1
unknown

Not on your lists

comp(9369..9440)
DNA (72bp)
transferRNA Pseudo
anamox1_curated_scaffold_1982_9

Not on your lists

comp(9541..10626)
DNA (1086bp) protein (362aa)
PfkB domain protein Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GEJ4_SPITZ
Marine sediment metagenome DNA, contig: S01H1_L03399 {ECO:0000313|EMBL:GAF70016.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PfkB domain-containing protein
anamox1_curated_scaffold_1982_10
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10821..11306
DNA (486bp) protein (162aa)
Universal stress protein family bin=GWC2_Planctomycetes_45_44 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
universal stress protein UspA-like protein
Tax=GWC2_Planctomycetes_45_44_curated
anamox1_curated_scaffold_1982_11
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11453..13759
DNA (2307bp) protein (769aa)
Amino acid permease family Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQC0_9BACT
Amino acid permease family {ECO:0000313|EMBL:EDY83722.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
amino acid permease
anamox1_curated_scaffold_1982_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13781..14458)
DNA (678bp) protein (226aa)
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator bin=CNBR_ACIDO species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DtxR family iron (metal) dependent repressor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
anamox1_curated_scaffold_1982_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14630..15484
DNA (855bp) protein (285aa)
Manganese ABC transporter substrate binding protein Tax=Planctomyces maris DSM 8797 RepID=A6C9N9_9PLAN
Manganese ABC transporter substrate binding protein {ECO:0000313|EMBL:EDL58527.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
periplasmic solute binding protein
Displaying 14 items

View Taxonomy