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anamox1_curated_scaffold_2093

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2093_1
RLO_PLX_64_10, Bacteria

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110..1225
DNA (1116bp) protein (372aa)
Putative ABC transporter ATP-binding protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0II22_PHYMF
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_2093_2

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comp(1244..2389)
DNA (1146bp) protein (382aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN83768.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Rhomboid family protein bin=GWF2_Planctomycetes_42_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
rhomboid family protein
anamox1_curated_scaffold_2093_3
unknown

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comp(2483..3757)
DNA (1275bp) protein (425aa)

This feature has no annotations

anamox1_curated_scaffold_2093_4
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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3864..5312
DNA (1449bp) protein (483aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase bin=GWF2_Planctomycete_41_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
anamox1_curated_scaffold_2093_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(5386..5802)
DNA (417bp) protein (139aa)
50S ribosomal protein L19 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IDR8_PHYMF
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_2093_6
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(5946..6650)
DNA (705bp) protein (235aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IC70_PHYMF
anamox1_curated_scaffold_2093_7
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(6840..7217)
DNA (378bp) protein (126aa)
30S ribosomal protein S16 bin=GWF2_Planctomycetes_42_9 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
30S ribosomal protein S16
Tax=GWF2_Planctomycetes_42_9_curated
anamox1_curated_scaffold_2093_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7482..8684
DNA (1203bp) protein (401aa)
6-phosphofructokinase (EC:2.7.1.-)
6-phosphofructokinase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJ92_PHYMF
Tax=GWF2_Verrucomicrobia_62_7_curated
anamox1_curated_scaffold_2093_9
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8708..9625)
DNA (918bp) protein (306aa)
N-acetylmuramic acid 6-phosphate etherase Tax=Pelosinus fermentans JBW45 RepID=I8TU90_9FIRM
N-acetylmuramic acid 6-phosphate etherase
N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:AJQ28756.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
anamox1_curated_scaffold_2093_10
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(9666..10832)
DNA (1167bp) protein (389aa)
anmK_murQ; anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase (EC:2.7.1.170 4.2.1.126)
Anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:BAM04499.1}; EC=2.7.1.170 {ECO:0000313|EMBL:BAM04499.1};; EC=4.2.1.126 {ECO:0000313|EMBL:BAM04499.1};; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Anhydro-N-acetylmuramic acid kinase/N-acetylmuramic acid 6-phosphate etherase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGW1_PHYMF
anamox1_curated_scaffold_2093_11
CG_Elusi_03, Elusimicrobia, Bacteria

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11017..12096
DNA (1080bp) protein (360aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000373EE8B
Predicted dehydrogenases and related proteins
Tax=CG_Elusi_03
anamox1_curated_scaffold_2093_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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12156..12980
DNA (825bp) protein (275aa)
Xylose isomerase domain protein TIM barrel Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1P6_9CHLR
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFH82690.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Sugar phosphate isomerases/epimerases
anamox1_curated_scaffold_2093_13
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13041..14309
DNA (1269bp) protein (423aa)
Muropeptide transport protein (MFS family) Tax=Ralstonia solanacearum CMR15 RepID=D8NA35_RALSL
ampG; muropeptide transport protein (MFS family)
Muropeptide transport protein (MFS family) {ECO:0000313|EMBL:CBJ39504.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
anamox1_curated_scaffold_2093_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14322..14771
DNA (450bp) protein (150aa)
Prolyl oligopeptidase family protein Tax=Opitutaceae bacterium TAV1 RepID=I6ARI2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKF04891.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
peptidase
Displaying 14 items

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