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anamox1_curated_scaffold_4788

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4788_1
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1..1218
DNA (1218bp) protein (406aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III subunit alpha Tax=Schlesneria paludicola RepID=UPI00029AE03C
Tax=RBG_13_Planctomycetes_62_9_curated
anamox1_curated_scaffold_4788_2
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1218..1760
DNA (543bp) protein (181aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
2''-5'' RNA ligase Tax=Sphingobium sp. AP49 RepID=J2KUX7_9SPHN
2'-5' RNA ligase
anamox1_curated_scaffold_4788_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(1745..2533)
DNA (789bp) protein (263aa)
5'-nucleotidase SurE bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
stationary-phase survival protein SurE
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_4788_4
unknown

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comp(2533..4542)
DNA (2010bp) protein (670aa)

This feature has no annotations

anamox1_curated_scaffold_4788_5

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comp(4651..5316)
DNA (666bp) protein (222aa)
Zinc finger, DksA/TraR C4-type Tax=Nocardioides sp. CF8 RepID=R7XVW3_9ACTO
Marine sediment metagenome DNA, contig: S01H1_S35796 {ECO:0000313|EMBL:GAG49609.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DksA/TraR C4-type zinc finger protein
anamox1_curated_scaffold_4788_6
Sutterella parvirubra, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5413..5853)
DNA (441bp) protein (147aa)
Mutator mutT protein Tax=Sutterella parvirubra YIT 11816 RepID=H3KEN3_9BURK
Mutator mutT protein {ECO:0000313|EMBL:EHY31420.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella parvirubra YIT 11816.;"
NUDIX hydrolase
anamox1_curated_scaffold_4788_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7844..8071)
DNA (228bp) protein (76aa)
Signal peptide peptidase SppA, 36K type Tax=Chthoniobacter flavus Ellin428 RepID=B4D455_9BACT
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EDY18656.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anamox1_curated_scaffold_4788_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8792..9346
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAN7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40296.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 8 items

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