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anamox1_curated_scaffold_3486

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3486_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1..954)
DNA (954bp) protein (318aa)
RNA polymerase sigma-54 factor Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA06_SINAD
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AGA25700.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
anamox1_curated_scaffold_3486_2
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(951..1577)
DNA (627bp) protein (209aa)
Recombination protein RecR bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
recombination protein RecR
Tax=RBG_13_Planctomycetes_46_10_curated
anamox1_curated_scaffold_3486_3
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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1778..4147
DNA (2370bp) protein (790aa)
Putative uncharacterized protein Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UAB6_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD73691.1}; species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
anamox1_curated_scaffold_3486_4
unknown

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comp(4221..4946)
DNA (726bp) protein (242aa)

This feature has no annotations

anamox1_curated_scaffold_3486_5
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5294..6160
DNA (867bp) protein (289aa)
Radical SAM domain protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R802_PIRSD
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ADB19333.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
anamox1_curated_scaffold_3486_6
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

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6233..7429
DNA (1197bp) protein (399aa)
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182)
Tax=RifOxyB12_full_OP3_50_7_curated
anamox1_curated_scaffold_3486_7
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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7504..8676
DNA (1173bp) protein (391aa)
Putative uncharacterized protein Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCT7_PARUW
hypothetical protein
F-box/LRR-repeat protein 14 {ECO:0000313|EMBL:KIC71829.1}; species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
anamox1_curated_scaffold_3486_8
unknown

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comp(8703..8858)
DNA (156bp) protein (52aa)

This feature has no annotations

anamox1_curated_scaffold_3486_9
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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8999..9661
DNA (663bp) protein (221aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Planctomycetes_59_8_curated
Displaying 9 items

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