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anamox1_curated_scaffold_567

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_567_1
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(1..636)
DNA (636bp) protein (212aa)
Serineaspartate repeat-containing protein I, putative Tax=Acanthamoeba castellanii str. Neff RepID=L8GQC6_ACACA
RNA polymerase Rpb1 repeat containing protein {ECO:0000313|EMBL:ELR24713.1}; species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
anamox1_curated_scaffold_567_2
unknown

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1148..1558
DNA (411bp) protein (137aa)

This feature has no annotations

anamox1_curated_scaffold_567_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1573..3372
DNA (1800bp) protein (600aa)
hypothetical protein Tax=Bacteria RepID=UPI0003740C55
Xyloglucanase {ECO:0000313|EMBL:GAL86787.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
anamox1_curated_scaffold_567_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3379..3837)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002D77FC1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFD06782.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_567_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3959..4924)
DNA (966bp) protein (322aa)
ADP-L-glycero-D-manno-heptose-6-epimerase Tax=Spirosoma spitsbergense RepID=UPI000366992D
ADP-L-glycero-D-manno-heptose-6-epimerase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5056..6009
DNA (954bp) protein (318aa)
Serine/threonine protein kinase bin=GWC2_Bacteroidetes_40_13 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
serine/threonine protein kinase
Tax=GWE2_Bacteroidetes_40_63_curated
anamox1_curated_scaffold_567_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6107..8272)
DNA (2166bp) protein (722aa)
PKD domain containing protein Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QKN7_SPILD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADB40203.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
anamox1_curated_scaffold_567_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

8426..9082
DNA (657bp) protein (219aa)
ABC-type transport system involved in cytochrome c biogenesis, permease component Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KV04_SOLCM
ABC transporter involved in cytochrome c biogenesis permease
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_9
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9148..9774
DNA (627bp) protein (209aa)
Cytochrome c assembly protein Tax=Sphingobacterium sp. (strain 21) RepID=F4C3R7_SPHS2
ABC transporter permease {ECO:0000313|EMBL:KFD39997.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
cytochrome C assembly protein
anamox1_curated_scaffold_567_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9747..9965
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXV7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93799.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
anamox1_curated_scaffold_567_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

9979..10368
DNA (390bp) protein (130aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00038033D6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists


comp(10568..10912)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 Tax=Prevotella multisaccharivorax DSM 17128 RepID=F8NC60_9BACT
LSU ribosomal protein L20p
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(10999..11196)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW71_SOLCM
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_567_14
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11230..11700)
DNA (471bp) protein (157aa)
Translation initiation factor IF-3 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HWD3_9SPHI
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
translation initiation factor IF-3
anamox1_curated_scaffold_567_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11836..13773)
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Threonine--tRNA ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU4_NIAKG
threonyl-tRNA synthetase
anamox1_curated_scaffold_567_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14085..15611
DNA (1527bp) protein (509aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
GMP synthase Tax=Cytophagales str. B6 RepID=UPI0003B7472C
GMP synthase
anamox1_curated_scaffold_567_17
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15608..16831
DNA (1224bp) protein (408aa)
Peptidoglycan-binding lysin domain bin=GWF2_Bacteroidetes_29_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
Tax=BJP_08E140C01_Bacteriodales_41_10
anamox1_curated_scaffold_567_18
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


16977..17210
DNA (234bp) protein (78aa)
50S ribosomal protein L28 Tax=Cytophagales str. B6 RepID=UPI0003B30FA4
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
50S ribosomal protein L28
anamox1_curated_scaffold_567_19
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


17223..17405
DNA (183bp) protein (61aa)
50S ribosomal protein L33 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z0W7_BELBD
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
anamox1_curated_scaffold_567_20
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17427..17579
DNA (153bp) protein (51aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTD6_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05714.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
anamox1_curated_scaffold_567_21
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17657..18607
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3V0_9FLAO
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
signal recognition particle-docking protein FtsY
anamox1_curated_scaffold_567_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

18614..19921
DNA (1308bp) protein (436aa)
Ribosomal protein S12 methylthiotransferase RimO Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWB0_SOLCM
ribosomal protein S12 methylthiotransferase RimO
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_23
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20167..20832
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYX3_HALH1
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEE52660.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_567_24
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

21040..22002
DNA (963bp) protein (321aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QXU3_CHLT3
cobalamin (vitamin B12) biosynthesis CbiX protein
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ACF13471.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
anamox1_curated_scaffold_567_25
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

22002..22580
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QXU2_CHLT3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF13470.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
anamox1_curated_scaffold_567_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

22603..22947
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Niabella soli DSM 19437 RepID=H1NUL1_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_567_27
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22964..26398)
DNA (3435bp) protein (1145aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
pyruvate carboxylase Tax=Nafulsella turpanensis RepID=UPI000349A848
pyruvate carboxylase
anamox1_curated_scaffold_567_28
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26677..28290
DNA (1614bp) protein (538aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
UPF0747 protein HMPREF0766_10884 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VIR5_9SPHI
hypothetical protein
anamox1_curated_scaffold_567_29
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28294..28887
DNA (594bp) protein (198aa)
Possible glycosyltransferase bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
wcfS; undecaprenyl-phosphate galactose phosphotransferase
Tax=GWF2_Bacteroidetes_33_38_curated
anamox1_curated_scaffold_567_30
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

29005..31620
DNA (2616bp) protein (872aa)
TonB-dependent receptor Tax=Niabella soli DSM 19437 RepID=H1NLK6_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Displaying items 1-30 of 40 in total

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