ggKbase home page

anamox1_curated_scaffold_983

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_983_1
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..319
DNA (318bp) protein (106aa)
Transposase IS4 family protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFA8_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ETZ21578.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
transposase IS4 family protein
anamox1_curated_scaffold_983_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1157..1489
DNA (333bp) protein (111aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037BE16E
L-fucose mutarotase {ECO:0000313|EMBL:KIC89609.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
anamox1_curated_scaffold_983_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..3670)
DNA (2151bp) protein (717aa)
glycoside hydrolase family protein (EC:3.2.1.52)
N-acetyl-beta-hexosaminidase Tax=Rhodanobacter spathiphylli B39 RepID=I4VRX4_9GAMM
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:EIL89965.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anamox1_curated_scaffold_983_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3953..4336)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI000377C469
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48311.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox1_curated_scaffold_983_5
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4473..5834)
DNA (1362bp) protein (454aa)
Alpha-L-fucosidase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB40_CHIPD
alpha-L-fucosidase
Contig55, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76782.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
anamox1_curated_scaffold_983_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5900..6982)
DNA (1083bp) protein (361aa)
aminoglycoside phosphotransferase Tax=Pedobacter agri RepID=UPI00029B4DDE
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KIC94138.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aminoglycoside phosphotransferase
anamox1_curated_scaffold_983_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6984..7760)
DNA (777bp) protein (259aa)
hypothetical protein AnHS1_06767 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
anamox1_curated_scaffold_983_8
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

7927..8556
DNA (630bp) protein (210aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox1_curated_scaffold_983_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8633..9007
DNA (375bp) protein (125aa)
Putative transcriptional regulator, ArsR family Tax=Oligotropha carboxidovorans RepID=B6JBK2_OLICO
ArsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEI07263.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
anamox1_curated_scaffold_983_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9026..9520
DNA (495bp) protein (165aa)
Activator of Hsp90 ATPase 1 family protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZE9_HALH1
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEE48444.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_983_11
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..10052
DNA (462bp) protein (154aa)
Transcriptional activator ligand binding domain protein Tax=Methylobacter tundripaludum SV96 RepID=G3IVN7_9GAMM
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:EGW21774.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
transcriptional regulator, effector-binding domain/component
anamox1_curated_scaffold_983_12
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10168..10680
DNA (513bp) protein (171aa)
activator of HSP90 ATPase Tax=Rhizobium sp. (strain BR816) RepID=UPI00037F306C
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:KEC78647.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
activator of Hsp90 ATPase 1 family protein
anamox1_curated_scaffold_983_13
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10693..11190
DNA (498bp) protein (166aa)
hypothetical protein Tax=Pseudomonas nitroreducens RepID=UPI00030EC855
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KJK03296.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
3-demethylubiquinone-9 3-methyltransferase family protein
anamox1_curated_scaffold_983_14
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11228..11821
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SAG1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK92836.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
anamox1_curated_scaffold_983_15
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

11863..12309
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Leptospira interrogans RepID=J4S767_LEPIR
activator of Hsp90 ATPase 1 family protein
Tax=RBG_16_Zixibacteria_50_21_curated
anamox1_curated_scaffold_983_16
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12340..13407)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SA0_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59714.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
anamox1_curated_scaffold_983_17
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13519..13860
DNA (342bp) protein (114aa)
Alkylphosphonate utilization operon protein PhnA Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G2N3_ECHVK
Phosphonoacetate hydrolase {ECO:0000313|EMBL:KIF34050.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
alkylphosphonate utilization operon protein PhnA
anamox1_curated_scaffold_983_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13950..14444
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD06_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40383.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
anamox1_curated_scaffold_983_19
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14473..15057)
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7R7_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33448.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
anamox1_curated_scaffold_983_20
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15067..15462)
DNA (396bp) protein (132aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:AHM62784.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
anamox1_curated_scaffold_983_21
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15468..15905)
DNA (438bp) protein (146aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Fulvivirga imtechensis AK7 RepID=L8JSM2_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELR70494.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
bleomycin resistance protein
anamox1_curated_scaffold_983_22
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15954..16391)
DNA (438bp) protein (146aa)
Transcriptional regulator, AraC family Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G2D9_9SPHI
AraC family transcriptional regulator {ECO:0000313|EMBL:GAL83646.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
AraC family transcriptional regulator
anamox1_curated_scaffold_983_23
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16472..16927)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Rhizobium fredii (strain HH103) RepID=G9A1L3_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE97593.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
anamox1_curated_scaffold_983_24
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17281..18492)
DNA (1212bp) protein (404aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TTG5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKF86271.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
anamox1_curated_scaffold_983_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18685..19260
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBL6_GEOUR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
anamox1_curated_scaffold_983_26
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19411..21048)
DNA (1638bp) protein (546aa)
acyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.-)
Acyl-CoA carboxylase carboxyl transferase subunit beta {ECO:0000313|EMBL:CAL67265.1}; EC=6.4.1.- {ECO:0000313|EMBL:CAL67265.1};; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
Acyl-CoA carboxylase carboxyl transferase subunit beta Tax=Gramella forsetii (strain KT0803) RepID=A0M3S0_GRAFK
anamox1_curated_scaffold_983_27
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21160..21654)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000363D750
DinB family protein
DinB family protein {ECO:0000313|EMBL:CCG99410.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
anamox1_curated_scaffold_983_28
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21758..22618)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH87_FLUTR
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_983_29
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22627..23025)
DNA (399bp) protein (133aa)
Putative uncharacterized protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SH4_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59640.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
anamox1_curated_scaffold_983_30
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23156..24805)
DNA (1650bp) protein (550aa)
Uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
Displaying items 1-30 of 34 in total

View Taxonomy