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anamox1_curated_scaffold_215

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_215_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2..2869
DNA (2868bp) protein (956aa)
Gliding motility-related protein Tax=Saprospira grandis (strain Lewin) RepID=H6L2G8_SAPGL
sprB; gliding motility protein SprB
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_215_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3029..4840
DNA (1812bp) protein (604aa)
PKD domain containing protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEW0_CHIPD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACU59687.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_215_3
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5157..7256)
DNA (2100bp) protein (700aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase bin=GWB2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Tax=GWD2_Bacteroidetes_33_33_curated
anamox1_curated_scaffold_215_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7385..9172
DNA (1788bp) protein (596aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Elongation factor 4 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHG5_FLUTR
GTP-binding protein LepA
anamox1_curated_scaffold_215_5
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9340..10755)
DNA (1416bp) protein (472aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
RNA-splicing ligase RtcB Tax=Fulvivirga imtechensis AK7 RepID=L8JVA3_9BACT
hypothetical protein
anamox1_curated_scaffold_215_trna_2
unknown

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comp(10782..10852)
DNA (71bp)
transferRNA His
anamox1_curated_scaffold_215_trna_1
unknown

Not on your lists

comp(10861..10931)
DNA (71bp)
transferRNA Phe
anamox1_curated_scaffold_215_6
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11352..12164)
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=root RepID=R6VBH9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC95633.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
short-chain dehydrogenase
anamox1_curated_scaffold_215_7
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12326..12874
DNA (549bp) protein (183aa)
Putative outer membrane protein Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YZJ1_AEQSU
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:AFL82409.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
anamox1_curated_scaffold_215_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12871..13236
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEY4_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54052.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
anamox1_curated_scaffold_215_9
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13372..13587)
DNA (216bp) protein (72aa)
hypothetical protein Tax=Halomonas lutea RepID=UPI0003668BE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE59667.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
anamox1_curated_scaffold_215_10
unknown

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comp(13597..14739)
DNA (1143bp) protein (381aa)

This feature has no annotations

anamox1_curated_scaffold_215_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(14736..15194)
DNA (459bp) protein (153aa)
ECF subfamily RNA polymerase sigma-24 subunit bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
RNA polymerase subunit sigma-24
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox1_curated_scaffold_215_12
unknown

Not on your lists

15398..15775
DNA (378bp) protein (126aa)

This feature has no annotations

anamox1_curated_scaffold_215_13
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15845..16834
DNA (990bp) protein (330aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS04011.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein AnHS1_14427 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
anamox1_curated_scaffold_215_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(16932..18491)
DNA (1560bp) protein (520aa)
Fibronectin type III domain protein bin=GWB2_Ignavibacteria_35_12 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_215_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18488..24724)
DNA (6237bp) protein (2079aa)
TIGR02542 family protein bin=GWB2_Ignavibacteria_35_12 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_215_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24727..26226)
DNA (1500bp) protein (500aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI00037C10FD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD54475.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
anamox1_curated_scaffold_215_17
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26706..27458
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein HMPREF0204_10801 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWA3_9FLAO
Probable transcriptional regulatory protein HMPREF0204_10801 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
anamox1_curated_scaffold_215_18
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27496..29409)
DNA (1914bp) protein (638aa)
Signal transduction histidine kinase Tax=Methanolobus psychrophilus R15 RepID=K4MCM8_9EURY
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFV23903.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
anamox1_curated_scaffold_215_19
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29495..31042
DNA (1548bp) protein (516aa)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R433_OWEHD
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:AEV33100.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
anamox1_curated_scaffold_215_20
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31207..33141
DNA (1935bp) protein (645aa)
Signal transduction histidine kinase bin=GWF2_Bacteroidetes_41_31 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
signal transduction histidine kinase
Tax=GWF2_Bacteroidetes_41_31_curated
anamox1_curated_scaffold_215_21
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

33104..33748
DNA (645bp) protein (215aa)
two component LuxR family transcriptional regulator bin=GWF2_Bacteroidetes_41_31 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
response regulator receiver
Tax=BJP_IG2103_Bacteroidetes_37_22
anamox1_curated_scaffold_215_22
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33893..35224
DNA (1332bp) protein (444aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
Phosphoribosylamine--glycine ligase Tax=Coprobacter fastidiosus NSB1 RepID=U5CBQ4_9PORP
phosphoribosylamine--glycine ligase
anamox1_curated_scaffold_215_23
unknown

Not on your lists

comp(35217..35402)
DNA (186bp) protein (62aa)

This feature has no annotations

anamox1_curated_scaffold_215_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35706..36713
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUE1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR95341.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
anamox1_curated_scaffold_215_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

36762..37451
DNA (690bp) protein (230aa)
Phosphoribosylformylglycinamidine synthase 1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHJ5_RUNSL
phosphoribosylformylglycinamidine synthase 1
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_215_26
unknown

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comp(37389..39458)
DNA (2070bp) protein (690aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003704BB1
coagulation factor 5/8 type domain-containing protein
anamox1_curated_scaffold_215_27
unknown

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39768..41141
DNA (1374bp) protein (458aa)

This feature has no annotations

anamox1_curated_scaffold_215_28
unknown

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comp(41145..41294)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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