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anamox1_curated_scaffold_720

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_720_trna_1
unknown

Not on your lists

comp(727..798)
DNA (72bp)
transferRNA Val
anamox1_curated_scaffold_720_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(854..1567)
DNA (714bp) protein (238aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EWS55750.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EWS55750.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
DNA polymerase III, epsilon subunit Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI23_METPP
anamox1_curated_scaffold_720_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1564..2379)
DNA (816bp) protein (272aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
prolipoprotein diacylglyceryl transferase Tax=Caldimonas manganoxidans RepID=UPI0003715A96
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_720_3
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2495..4177
DNA (1683bp) protein (561aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Dihydroxy-acid dehydratase Tax=Methylibium petroleiphilum (strain PM1) RepID=ILVD_METPP
anamox1_curated_scaffold_720_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4569)
DNA (279bp) protein (93aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034D97E0
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71613.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_720_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4693..6675)
DNA (1983bp) protein (661aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
acsA; acetyl-coenzyme A synthetase AcsA (EC:6.2.1.1)
Acetyl-coenzyme A synthetase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNC2_9BURK
anamox1_curated_scaffold_720_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6961..8508
DNA (1548bp) protein (516aa)
fumarate hydratase class I (EC:4.2.1.2)
Tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNC0_9BURK
Tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha {ECO:0000313|EMBL:EGJ09838.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_720_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8546..9781)
DNA (1236bp) protein (412aa)
Transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTG0_9BURK
Transmembrane protein {ECO:0000313|EMBL:EGJ11628.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mechanosensitive ion channel family protein
anamox1_curated_scaffold_720_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..10826)
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUV9_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96796.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_720_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10862..11794
DNA (933bp) protein (311aa)
Putative MoxR like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTG2_9BURK
Putative MoxR like protein {ECO:0000313|EMBL:EGJ11630.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ATPase
anamox1_curated_scaffold_720_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11804..12769
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUW1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96798.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_720_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12766..14865
DNA (2100bp) protein (700aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUW2_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_720_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14873..16009
DNA (1137bp) protein (379aa)
membrane-bound lytic murein transglycosylase B (EC:3.2.1.-)
Lytic murein transglycosylase B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMA1_9BURK
Lytic murein transglycosylase B {ECO:0000313|EMBL:EGJ09469.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_720_13
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16011..16409
DNA (399bp) protein (133aa)
lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase {ECO:0000313|EMBL:EWS59108.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EWS59108.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Lactoylglutathione lyase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJY9_METPP
anamox1_curated_scaffold_720_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16473..17027
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J2L5H8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80483.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
anamox1_curated_scaffold_720_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17050..17724
DNA (675bp) protein (225aa)
Uncharacterized protein involved in cation transport Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLD2_9BURK
Uncharacterized protein involved in cation transport {ECO:0000313|EMBL:EHR70453.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_720_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17796..18404)
DNA (609bp) protein (203aa)
Putative MobA-like protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLD1_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_720_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18488..19216
DNA (729bp) protein (243aa)
pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase PdxH (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUV2_RUBGI
anamox1_curated_scaffold_720_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19279..20157)
DNA (879bp) protein (293aa)
Putative metalloprotease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL20_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_720_19
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20195..20764)
DNA (570bp) protein (190aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
dcd; deoxycytidine triphosphate deaminase Dcd (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVF8_RUBGI
anamox1_curated_scaffold_720_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20920..21459
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUX4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12142.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_720_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21553..21948)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Hydrogenophaga sp. PBC RepID=I4MK53_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89593.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
anamox1_curated_scaffold_720_22
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22103..23674
DNA (1572bp) protein (524aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
FAD dependent oxidoreductase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1L7_LEPCP
glpD; glycerol-3-phosphate dehydrogenase
anamox1_curated_scaffold_720_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23706..24155)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Brachymonas chironomi RepID=UPI00037604C0
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycine cleavage system H protein
anamox1_curated_scaffold_720_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24307..26232)
DNA (1926bp) protein (642aa)
Selenocysteine-specific translation elongation factor Tax=Hydrogenophaga sp. PBC RepID=I4MK55_9BURK
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EIK89595.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
selenocysteine-specific translation elongation factor
anamox1_curated_scaffold_720_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26229..27671)
DNA (1443bp) protein (481aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
selA; L-seryl-tRNA(Ser) selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=Hydrogenophaga sp. PBC RepID=I4MK57_9BURK
anamox1_curated_scaffold_720_26
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27671..28726)
DNA (1056bp) protein (352aa)
Protein FdhE homolog Tax=Hydrogenophaga sp. PBC RepID=I4MK58_9BURK
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase accessory protein
anamox1_curated_scaffold_720_27
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28941..29561)
DNA (621bp) protein (207aa)
Formate dehydrogenase, gamma subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK59_9BURK
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EIK89599.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase subunit gamma
anamox1_curated_scaffold_720_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29561..30448)
DNA (888bp) protein (296aa)
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:EIK89600.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EIK89600.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fdoH; formate dehydrogenase subunit beta (EC:1.2.1.2)
Formate dehydrogenase, iron-sulfur subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK60_9BURK
anamox1_curated_scaffold_720_29
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30452..32896)
DNA (2445bp) protein (815aa)
Formate dehydrogenase, alpha subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK61_9BURK
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EIK89601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase subunit alpha
Displaying items 1-30 of 38 in total

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