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anamox1_curated_scaffold_360

Search features with annotation key words

Displaying items 31-60 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_360_29
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31740..31997)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Candidatus Symbiobacter mobilis CR RepID=U5N4M6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX86215.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
anamox1_curated_scaffold_360_30
unknown

Not on your lists

comp(32434..32727)
DNA (294bp) protein (98aa)

This feature has no annotations

anamox1_curated_scaffold_360_31
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32967..35144)
DNA (2178bp) protein (726aa)
penicillin-binding protein 1c (EC:2.4.1.129)
Penicillin-binding protein 1C Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZB2_ALIDB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_360_32
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35150..41098)
DNA (5949bp) protein (1983aa)
Alpha-2-macroglobulin domain protein Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZC2_ALIDB
alpha-2-macroglobulin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_360_33
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41136..42524)
DNA (1389bp) protein (463aa)
Putative M17 family peptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQ80_RUBGI
putative M17 family peptidase
Putative M17 family peptidase {ECO:0000313|EMBL:BAL95167.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_360_34
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43093..43527
DNA (435bp) protein (145aa)
Regulator of nucleoside diphosphate kinase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHG3_METPP
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:EWS55625.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
regulator of nucleoside diphosphate kinase
anamox1_curated_scaffold_360_35
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43556..44401)
DNA (846bp) protein (282aa)
Putative aldo/keto reductase-family protein Tax=Bordetella bronchiseptica RepID=Q7WJV6_BORBR
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:KCV66339.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
aldo/keto reductase-family protein
anamox1_curated_scaffold_360_36
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44720..45253
DNA (534bp) protein (178aa)
Rrf2 family protein; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Rrf2 family protein
Tax=BJP_08E140C01_Burkholderiales_65_30
anamox1_curated_scaffold_360_37
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45246..45830
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ31_PUSST
Uncharacterized protein {ECO:0000313|EMBL:EWS55608.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
anamox1_curated_scaffold_360_38
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45893..46150
DNA (258bp) protein (86aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_360_39
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46292..46525
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=pseudomallei group RepID=I1WTR8_BURPE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_360_40
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46567..47373
DNA (807bp) protein (269aa)
Metallophosphoesterase Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QW5_RHOFD
Cyclic 3',5'-adenosine monophosphate phosphodiesterase {ECO:0000313|EMBL:EWS55617.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
metallophosphoesterase
anamox1_curated_scaffold_360_41
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47390..48226
DNA (837bp) protein (279aa)
Lipoprotein-like protein Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CBP2_ALCDB
Uncharacterized protein {ECO:0000313|EMBL:EWS62134.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
lipoprotein-like protein
anamox1_curated_scaffold_360_42
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48223..49143)
DNA (921bp) protein (307aa)
Phenylacetic acid-responsive transcriptional repressor Tax=Magnetospirillum sp. SO-1 RepID=M2Z3D6_9PROT
Phenylacetic acid degradation operon negative regulatory protein PaaX {ECO:0000313|EMBL:KIL98515.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
phenylacetic acid-responsive transcriptional repressor
anamox1_curated_scaffold_360_43
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49435..52206
DNA (2772bp) protein (924aa)
Phenylacetyl CoA Tax=Magnetospirillum sp. SO-1 RepID=M2Z2I4_9PROT
Phenylacetyl CoA {ECO:0000313|EMBL:EME68525.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
phenylacetyl CoA
anamox1_curated_scaffold_360_44
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52203..53096
DNA (894bp) protein (298aa)
Protein FdhD homolog Tax=Magnetospirillum sp. SO-1 RepID=M3A7S6_9PROT
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
formate dehydrogenase accessory protein
anamox1_curated_scaffold_360_45
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53093..53746
DNA (654bp) protein (218aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Magnetospirillum sp. SO-1 RepID=M3A6U2_9PROT
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:EME68523.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
padC; phenylacetyl-CoA:acceptor oxidoreductase
anamox1_curated_scaffold_360_46
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53746..54642
DNA (897bp) protein (299aa)
Phenylacetyl-CoA:acceptor oxidoreductase Tax=Magnetospirillum sp. SO-1 RepID=M2Z3E9_9PROT
Phenylacetyl-CoA:acceptor oxidoreductase {ECO:0000313|EMBL:EME68890.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
padD; phenylacetyl-CoA:acceptor oxidoreductase
anamox1_curated_scaffold_360_47
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54721..55011
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NPR7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYC51465.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
anamox1_curated_scaffold_360_48
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55008..55856
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS44_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35867.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
anamox1_curated_scaffold_360_49
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56018..56200
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPE2_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19274.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
anamox1_curated_scaffold_360_50
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56214..56609
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NPR7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CDH44062.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
anamox1_curated_scaffold_360_51
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56686..57381)
DNA (696bp) protein (232aa)
Winged helix family two component transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTG5_9BURK
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EGJ11633.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
kdpE; two-component system response regulator KdpE
anamox1_curated_scaffold_360_52
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57381..60170)
DNA (2790bp) protein (930aa)
kdpD; two-component system, sensor kinase protein KdpD (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Two-component system, sensor kinase protein KdpD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQX2_RUBGI
anamox1_curated_scaffold_360_53
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60193..61017)
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNA0_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV24693.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
anamox1_curated_scaffold_360_54
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61302..63437)
DNA (2136bp) protein (712aa)
potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
potassium-transporting ATPase subunit B Tax=Pseudomonas fluorescens RepID=UPI00030D94C6
anamox1_curated_scaffold_360_55
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63461..64189)
DNA (729bp) protein (243aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain Tax=Delftia sp. (strain Cs1-4) RepID=F6AR43_DELSC
anamox1_curated_scaffold_360_56
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64207..65913)
DNA (1707bp) protein (569aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=ATKA_DELAS
anamox1_curated_scaffold_360_57
unknown

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comp(66049..66147)
DNA (99bp) protein (33aa)

This feature has no annotations

anamox1_curated_scaffold_360_58
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66387..66731
DNA (345bp) protein (115aa)
Putative transcriptional regulator Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8KFP2_BURPE
transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABN91481.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1106a).;"
Displaying items 31-60 of 104 in total

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