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anamox1_curated_scaffold_827

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_827_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..820)
DNA (819bp) protein (273aa)
ABC-type dipeptide transport system, periplasmic component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIH8_9BURK
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EHR71798.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
extracellular solute-binding protein
anamox1_curated_scaffold_827_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

996..1973
DNA (978bp) protein (326aa)
IM pore protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKM6_9BURK
IM pore protein {ECO:0000313|EMBL:EGJ08894.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ABC transporter permease
anamox1_curated_scaffold_827_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1987..2934
DNA (948bp) protein (316aa)
IM pore protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKM5_9BURK
IM pore protein {ECO:0000313|EMBL:EGJ08893.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ABC transporter permease
anamox1_curated_scaffold_827_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2939..3919
DNA (981bp) protein (327aa)
peptide ABC transporter ATPase (EC:3.6.3.24)
peptide ABC transporter substrate-binding protein Tax=Caldimonas manganoxidans RepID=UPI00035ED608
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHR70013.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_827_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3916..4908
DNA (993bp) protein (331aa)
ABC transporter ATP-binding protein Tax=Caldimonas manganoxidans RepID=UPI00035DBE62
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJL74133.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
anamox1_curated_scaffold_827_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4937..5953)
DNA (1017bp) protein (339aa)
Cell division and transport-associated protein TolA Tax=Acidovorax RepID=A1W9I9_ACISJ
protein tola
Cell division and transport-associated protein TolA {ECO:0000313|EMBL:ABM42914.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox1_curated_scaffold_827_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5959..6327)
DNA (369bp) protein (123aa)
Biopolymer transport protein TolR Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW61_RUBGI
tolR; biopolymer transport protein TolR
Biopolymer transport protein TolR {ECO:0000313|EMBL:BAL97248.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_827_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6389..7120)
DNA (732bp) protein (244aa)
Transmembrane protein/ biopolymer transport Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNU4_9BURK
tolQ; biopolymer transport protein, TolQ
Transmembrane protein/ biopolymer transport {ECO:0000313|EMBL:EGJ10012.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_827_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7117..7542)
DNA (426bp) protein (142aa)
ybgC; tol-pal system-associated acyl-CoA thioesterase (EC:3.1.2.-)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:BAL97246.1}; EC=3.1.2.- {ECO:0000313|EMBL:BAL97246.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Tol-pal system-associated acyl-CoA thioesterase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW59_RUBGI
anamox1_curated_scaffold_827_10
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7589..8863)
DNA (1275bp) protein (425aa)
serine/threonine protein kinase-like protein (EC:2.7.11.1)
Serine/threonine protein kinase-like protein {ECO:0000313|EMBL:ABM95904.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ABM95904.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000371AB2A
anamox1_curated_scaffold_827_11
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9004..10230
DNA (1227bp) protein (409aa)
aminotransferase Tax=Ralstonia solanacearum RepID=UPI0001816BA5
aspartate aminotransferase a protein
Aminotransferase {ECO:0000313|EMBL:KFX29598.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
anamox1_curated_scaffold_827_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10255..10782)
DNA (528bp) protein (176aa)
N utilization substance protein B homolog Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNU7_9BURK
nusB; transcription antitermination protein NusB
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_827_13
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10779..11243)
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase Tax=Caldimonas manganoxidans RepID=UPI00037EDF75
anamox1_curated_scaffold_827_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11320..12411)
DNA (1092bp) protein (364aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ribBA; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein RibB/RibA (EC:3.5.4.25 4.1.99.12)
3,4-dihydroxy-2-butanone 4-phosphate synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNU9_9BURK
anamox1_curated_scaffold_827_15
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12509..13273)
DNA (765bp) protein (255aa)
hypothetical protein Tax=Geitlerinema sp. PCC 7105 RepID=UPI00036A939F
PEP motif-containing protein
PEP motif-containing protein {ECO:0000313|EMBL:AEB09481.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
anamox1_curated_scaffold_827_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13498..14598)
DNA (1101bp) protein (367aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTL8_9BURK
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_827_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14595..15782)
DNA (1188bp) protein (396aa)
Similar to type IV pilin protein PilV Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW52_RUBGI
type IV pilin protein PilV
Similar to type IV pilin protein PilV {ECO:0000313|EMBL:BAL97239.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_827_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..17026)
DNA (1248bp) protein (416aa)
Similar to fimbrial biogenesis protein PilX Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW51_RUBGI
Similar to fimbrial biogenesis protein PilX {ECO:0000313|EMBL:BAL97238.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
pilX; fimbrial biogenesis protein
anamox1_curated_scaffold_827_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17122..17868)
DNA (747bp) protein (249aa)
Putative fimbrial biogenesis protein PilW Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW50_RUBGI
pilW; putative fimbrial biogenesis protein PilW
Putative fimbrial biogenesis protein PilW {ECO:0000313|EMBL:BAL97237.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_827_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17862..18488)
DNA (627bp) protein (209aa)
Type IV pilus transmembrane FimT-like protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW49_RUBGI
type IV pilus transmembrane FimT-like protein
Type IV pilus transmembrane FimT-like protein {ECO:0000313|EMBL:BAL97236.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_827_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18491..19003)
DNA (513bp) protein (171aa)
Fimbrial protein, type IV pilin, putative PilE Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW48_RUBGI
fimbrial protein, type IV pilin, putative PilE
Fimbrial protein, type IV pilin, putative PilE {ECO:0000313|EMBL:BAL97235.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_827_22
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19103..19675)
DNA (573bp) protein (191aa)
Fimbrial biogenesis protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK04_METPP
Tfp pilus assembly protein FimT {ECO:0000313|EMBL:EWS58492.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
fimU; fimbrial biogenesis protein
anamox1_curated_scaffold_827_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19843..21093)
DNA (1251bp) protein (417aa)
glyA; serine hydroxymethyltransferase GlyA (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Serine hydroxymethyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW45_RUBGI
anamox1_curated_scaffold_827_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21317..22243)
DNA (927bp) protein (309aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR77_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10845.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative lytic transglycosylase
anamox1_curated_scaffold_827_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22490..24064
DNA (1575bp) protein (525aa)
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR76_9BURK
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:EGJ10844.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_827_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24328..24777)
DNA (450bp) protein (150aa)
Thioesterase superfamily protein Tax=Variovorax paradoxus (strain EPS) RepID=E6V4R1_VARPE
thioesterase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_827_27
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24820..25836)
DNA (1017bp) protein (339aa)
Limonene 1,2-monooxygenase {ECO:0000313|EMBL:EWS57852.1}; EC=1.14.13.107 {ECO:0000313|EMBL:EWS57852.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Luciferase-like monooxygenase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHV7_METPP
luciferase-like monooxygenase
anamox1_curated_scaffold_827_28
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25954..26355)
DNA (402bp) protein (134aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLD4_AZOSU
Histidine triad (HIT) protein {ECO:0000313|EMBL:KIF82906.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
anamox1_curated_scaffold_827_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26414..27112)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDE8_BRAJP
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX39848.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter
anamox1_curated_scaffold_827_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27109..28947)
DNA (1839bp) protein (613aa)
Uncharacterized protein Tax=Afipia clevelandensis ATCC 49720 RepID=K8NNF4_9BRAD
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:CDX39850.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter
Displaying items 1-30 of 57 in total

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