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anamox1_curated_scaffold_1350

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1350_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..988)
DNA (987bp) protein (329aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUI0_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR69406.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1350_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1039..1470)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HML9_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94256.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1350_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1524..3314)
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase oxidoreductase (EC:1.3.99.-)
acyl-CoA dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI00037D4378
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR69404.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1350_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3398..4099)
DNA (702bp) protein (234aa)
Transcriptional regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU81_9BURK
TetR family regulatory protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1350_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4271..4828
DNA (558bp) protein (186aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037B7F91
putative endonuclease
Putative endonuclease {ECO:0000313|EMBL:BAL94253.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1350_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4851..7697)
DNA (2847bp) protein (949aa)
aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 {ECO:0000313|EMBL:ADX45083.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ADX45083.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Aconitate hydratase 1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCU0_ACIAP
anamox1_curated_scaffold_1350_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7927..9306)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
ATP-binding region ATPase domain protein Tax=Alicycliphilus denitrificans RepID=E8TYL7_ALIDB
ATP-binding domain-containing protein
anamox1_curated_scaffold_1350_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9303..9983)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family Tax=Acidovorax sp. (strain JS42) RepID=A1WD62_ACISJ
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABM44187.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox1_curated_scaffold_1350_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9964..10323)
DNA (360bp) protein (120aa)
Propeptide PepSY amd peptidase M4 Tax=Alicycliphilus denitrificans RepID=E8TYL9_ALIDB
propeptide pepsy amd peptidase m4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ADV02028.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox1_curated_scaffold_1350_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10539..11135
DNA (597bp) protein (199aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003721522
Cytochrome B561 {ECO:0000313|EMBL:EZH76412.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes AD6.;"
Cytochrome b561 homolog 1
anamox1_curated_scaffold_1350_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11187..11588
DNA (402bp) protein (134aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00037F858D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
anamox1_curated_scaffold_1350_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11621..12097
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC4_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34862.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1350_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12110..14341
DNA (2232bp) protein (744aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Acidovorax sp. (strain JS42) RepID=A1WD67_ACISJ
FAD/NAD(P)-binding oxidoreductase subunit
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ABM44192.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox1_curated_scaffold_1350_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14322..15398
DNA (1077bp) protein (359aa)
ApbE family lipoprotein Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBP5_ALIDK
ApbE family lipoprotein
Apbe family lipoprotein {ECO:0000313|EMBL:GAO25632.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox1_curated_scaffold_1350_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15508..16674)
DNA (1167bp) protein (389aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DJR8_9BACT
Uncharacterized protein Mb2031c
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
anamox1_curated_scaffold_1350_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16767..17234)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIC7_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV02036.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox1_curated_scaffold_1350_17
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17465..18073
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR/AcrR family Tax=Oligotropha carboxidovorans RepID=F8BPS9_OLICM
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:EPZ15410.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
anamox1_curated_scaffold_1350_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18120..19160
DNA (1041bp) protein (347aa)
Secretion protein HlyD family protein Tax=Proteobacteria RepID=F4G4R8_ALIDK
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AEB84113.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
anamox1_curated_scaffold_1350_19
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19176..20981
DNA (1806bp) protein (602aa)
ABC transporter related Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGU6_ACIET
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM32769.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1350_20
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20978..22120
DNA (1143bp) protein (381aa)
Membrane protein Tax=Sphingobium RepID=T0ICW3_9SPHN
Membrane protein {ECO:0000313|EMBL:EQB07449.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
ABC-2 type transporter
anamox1_curated_scaffold_1350_21
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22135..23301
DNA (1167bp) protein (389aa)
ABC transporter permease Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XER3_PSEDE
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
anamox1_curated_scaffold_1350_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23298..24854
DNA (1557bp) protein (519aa)
RND efflux system, outer membrane lipoprotein, NodT family Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGU3_ACIET
NodT family RND efflux system, outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACM32766.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1350_23
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24941..26059
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGT9_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32762.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_1350_24
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26151..26609
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Thauera phenylacetica B4P RepID=N6ZWD7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98802.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
anamox1_curated_scaffold_1350_25
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26618..27085)
DNA (468bp) protein (156aa)
Universal stress protein Tax=Thauera terpenica 58Eu RepID=T0ARF0_9RHOO
Universal stress protein UspA {ECO:0000313|EMBL:EPZ15414.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
uspA2; universal stress protein, UspA family
anamox1_curated_scaffold_1350_26
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27140..27400)
DNA (261bp) protein (87aa)
Acyl-CoA-binding protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJA7_9BURK
Acyl-CoA-binding protein {ECO:0000313|EMBL:EHR70062.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
acyl-CoA-binding domain-containing protein
anamox1_curated_scaffold_1350_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27545..29173
DNA (1629bp) protein (543aa)
diacylglycerol O-acyltransferase, putative (EC:2.3.1.20)
Diacylglycerol O-acyltransferase, putative Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMF4_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1350_28
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29436..29987
DNA (552bp) protein (184aa)
Putative uncharacterized protein (Fragment) Tax=Ricinus communis RepID=B9TMM9_RICCO
Uncharacterized protein {ECO:0000313|EMBL:KDB51694.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
anamox1_curated_scaffold_1350_29
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30163..32331
DNA (2169bp) protein (723aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
indolepyruvate ferredoxin subunit alpha Tax=Caldimonas manganoxidans RepID=UPI00037B36C0
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit {ECO:0000313|EMBL:EHR72458.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1350_30
unknown

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32355..32444
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 30 items

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