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anamox1_curated_scaffold_1372

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1372_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2855)
DNA (2853bp) protein (951aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE76_METPP
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:KDB54064.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
anamox1_curated_scaffold_1372_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3097..3864
DNA (768bp) protein (256aa)
coaX; type III pantothenate kinase CoaX (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Type III pantothenate kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH4_RUBGI
anamox1_curated_scaffold_1372_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3919..5277)
DNA (1359bp) protein (453aa)
ATP-dependent protease ATPase subunit HslU Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH3_RUBGI
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1372_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5274..5810)
DNA (537bp) protein (179aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hslV; ATP-dependent protease subunit HslV (EC:3.4.25.-)
ATP-dependent protease subunit HslV Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU58_9BURK
anamox1_curated_scaffold_1372_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5882..7729)
DNA (1848bp) protein (616aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH1_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1372_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7847..8332)
DNA (486bp) protein (162aa)
RNA polymerase-binding transcription factor DksA Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN0_9BURK
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
dksA; putative DnaK suppressor protein DksA
anamox1_curated_scaffold_1372_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8675..9742)
DNA (1068bp) protein (356aa)
Putative GTPase, G3E family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU61_9BURK
cobalamin synthesis protein P47K
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1372_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9870..10745
DNA (876bp) protein (292aa)
Transport protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN2_9BURK
Transport protein {ECO:0000313|EMBL:EGJ09250.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
corC; magnesium and cobalt efflux protein CorC
anamox1_curated_scaffold_1372_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10745..12325
DNA (1581bp) protein (527aa)
lnt; apolipoprotein N-acyltransferase Lnt (EC:2.3.1.-)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Apolipoprotein N-acyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG7_RUBGI
anamox1_curated_scaffold_1372_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12322..13203)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0002DD2264
Na(+) dependent transporter,Sodium Bile acid symporter family protein {ECO:0000313|EMBL:KFE72020.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
bile acid:sodium symporter
anamox1_curated_scaffold_1372_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13289..14257
DNA (969bp) protein (323aa)
glyQ; glycyl-tRNA synthetase alpha subunit GlyQ (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Glycine--tRNA ligase alpha subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG6_RUBGI
anamox1_curated_scaffold_1372_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14261..16402
DNA (2142bp) protein (714aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glyS; glycyl-tRNA synthetase beta subunit GlyS (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN5_9BURK
anamox1_curated_scaffold_1372_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16402..17037
DNA (636bp) protein (212aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase GmhB {ECO:0000313|EMBL:BAL97701.1}; EC=3.1.3.- {ECO:0000313|EMBL:BAL97701.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
D,D-heptose 1,7-bisphosphate phosphatase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG4_RUBGI
anamox1_curated_scaffold_1372_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..18104
DNA (948bp) protein (316aa)
Putative metal-dependent hydrolase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU68_9BURK
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EHR69390.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1372_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18276..19454
DNA (1179bp) protein (393aa)
Candidate Isovaleryl-CoA dehydrogenase Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW71_RAMTT
Isovaleryl-CoA dehydrogenase
Candidate Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEG91641.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_1372_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19451..20185
DNA (735bp) protein (245aa)
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU69_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1372_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20216..21070
DNA (855bp) protein (285aa)
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase protein (EC:2.7.11.5)
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Isocitrate dehydrogenase kinase/phosphatase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYL9_LEPCP
anamox1_curated_scaffold_1372_18
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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21039..21404
DNA (366bp) protein (122aa)
transposase Tax=Glaciibacter superstes RepID=UPI0003B31851
Transposase {ECO:0000313|EMBL:ETW24907.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
transposase DDE domain protein
Displaying 18 items

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