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anamox1_curated_scaffold_1295

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1295_1
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..92
DNA (90bp) protein (30aa)
Elongation factor Tu Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PR64_MEIRD
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
anamox1_curated_scaffold_1295_2
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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167..478
DNA (312bp) protein (104aa)
30S ribosomal protein S10 Tax=Methylibium petroleiphilum (strain PM1) RepID=RS10_METPP
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
anamox1_curated_scaffold_1295_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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648..1316
DNA (669bp) protein (223aa)
50S ribosomal protein L3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL72_9BURK
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1319..1939
DNA (621bp) protein (207aa)
50S ribosomal protein L4 Tax=Rubrivivax RepID=I0HKY8_RUBGI
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1936..2265
DNA (330bp) protein (110aa)
50S ribosomal protein L23 Tax=Caldimonas manganoxidans RepID=UPI00035F7119
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2266..3093
DNA (828bp) protein (276aa)
50S ribosomal protein L2 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL75_9BURK
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rplB; 50S ribosomal protein L2
anamox1_curated_scaffold_1295_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3105..3380
DNA (276bp) protein (92aa)
30S ribosomal protein S19 Tax=Rubrivivax RepID=I0HKZ1_RUBGI
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3393..3728
DNA (336bp) protein (112aa)
50S ribosomal protein L22 Tax=Rubrivivax RepID=I0HKZ2_RUBGI
rplV; 50S ribosomal protein L22 RplV
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3745..4605
DNA (861bp) protein (287aa)
30S ribosomal protein S3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL78_9BURK
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_10
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4608..5024
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL16_LEPCP
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rplP; 50S ribosomal protein L16
anamox1_curated_scaffold_1295_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5040..5237
DNA (198bp) protein (66aa)
50S ribosomal protein L29 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL80_9BURK
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5234..5512
DNA (279bp) protein (93aa)
30S ribosomal protein S17 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL81_9BURK
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5676..6191
DNA (516bp) protein (172aa)
peroxiredoxin Tax=Caldimonas manganoxidans RepID=UPI000367B635
redoxin domain-containing protein
Thioredoxin fold-haboring protein {ECO:0000313|EMBL:GAO26103.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox1_curated_scaffold_1295_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6387..6755
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Thiomonas sp. FB-6 RepID=UPI00037A83C3
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_1295_15
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6784..7101
DNA (318bp) protein (106aa)
50S ribosomal protein L24 Tax=Ideonella sp. B508-1 RepID=UPI00034D17BF
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rplX; 50S ribosomal protein L24
anamox1_curated_scaffold_1295_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7113..7676
DNA (564bp) protein (188aa)
50S ribosomal protein L5 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL00_RUBGI
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7685..7990
DNA (306bp) protein (102aa)
30S ribosomal protein S14 Tax=Rubrivivax RepID=I0HL01_RUBGI
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1295_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8019..8414
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL02_RUBGI
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8437..8970
DNA (534bp) protein (178aa)
50S ribosomal protein L6 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL03_RUBGI
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_20
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8982..9347
DNA (366bp) protein (122aa)
50S ribosomal protein L18 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL18_LEPCP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rplR; 50S ribosomal protein L18
anamox1_curated_scaffold_1295_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9376..9894
DNA (519bp) protein (173aa)
30S ribosomal protein S5 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL90_9BURK
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpsE; 30S ribosomal protein S5
anamox1_curated_scaffold_1295_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9927..10109
DNA (183bp) protein (61aa)
50S ribosomal protein L30 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL06_RUBGI
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_23
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10109..10540
DNA (432bp) protein (144aa)
50S ribosomal protein L15 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL15_LEPCP
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_1295_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10566..11876
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL93_9BURK
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secY; preprotein translocase subunit SecY
anamox1_curated_scaffold_1295_25
Burkholderia rhizoxinica, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11957..12175
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5APP2_BURRH
protein translation Initiation Factor 1 (IF-1)
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;"
anamox1_curated_scaffold_1295_26
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12204..12317
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Advenella kashmirensis W13003 RepID=V8QY02_9BURK
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
rpmJ; 50S ribosomal protein L36
anamox1_curated_scaffold_1295_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12353..12718
DNA (366bp) protein (122aa)
30S ribosomal protein S13 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL96_9BURK
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpsM; 30S ribosomal protein S13
anamox1_curated_scaffold_1295_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12754..13158
DNA (405bp) protein (135aa)
30S ribosomal protein S11 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTW2_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
30S ribosomal protein S11
anamox1_curated_scaffold_1295_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13384..14007
DNA (624bp) protein (208aa)
30S ribosomal protein S4 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL13_RUBGI
rpsD; 30S ribosomal protein S4 RpsD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1295_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14160..15146
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha RpoA (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA-directed RNA polymerase subunit alpha Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL14_RUBGI
Displaying items 1-30 of 38 in total

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