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anamox1_curated_scaffold_1951

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1951_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..747
DNA (747bp) protein (249aa)
indolepyruvate ferredoxin subunit alpha Tax=Caldimonas manganoxidans RepID=UPI00037B36C0
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit {ECO:0000313|EMBL:EJL77811.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative indolepyruvate ferredoxin oxidoreductase, subunit A
anamox1_curated_scaffold_1951_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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771..2297
DNA (1527bp) protein (509aa)
Putative indolepyruvate oxidoreductase subunit B Tax=Variovorax paradoxus (strain EPS) RepID=E6UV97_VARPE
indolepyruvate oxidoreductase subunit b
Putative indolepyruvate oxidoreductase subunit B {ECO:0000313|EMBL:ADU38691.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
anamox1_curated_scaffold_1951_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2362..2826)
DNA (465bp) protein (155aa)
UPI0003CDEF42 related cluster Tax=unknown RepID=UPI0003CDEF42
universal stress protein UspA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_1951_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2890..3555)
DNA (666bp) protein (222aa)
TetR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR0_9BURK
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:EGJ11728.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1951_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3628..4572
DNA (945bp) protein (315aa)
ABC transporter related protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMF7_RUBGI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:BAL94194.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1951_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4569..5411
DNA (843bp) protein (281aa)
ABC-2 type transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR2_9BURK
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter permease/ATP-binding protein
anamox1_curated_scaffold_1951_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5507..6118
DNA (612bp) protein (204aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
clpP; ATP-dependent Clp protease, protease subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR3_9BURK
anamox1_curated_scaffold_1951_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6124..6375
DNA (252bp) protein (84aa)
Putative transcriptional regulator, BolA superfamily Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ41_9BURK
BolA family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_1951_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6372..7019
DNA (648bp) protein (216aa)
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP phosphoribosyltransferase Tax=Rubrivivax RepID=I0HMG2_RUBGI
anamox1_curated_scaffold_1951_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7016..8350
DNA (1335bp) protein (445aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTR7_9BURK
anamox1_curated_scaffold_1951_11
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

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comp(8369..8770)
DNA (402bp) protein (134aa)
PilT protein domain protein Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XRG1_STAC7
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:AFZ34641.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
anamox1_curated_scaffold_1951_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8751..8990)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE56985.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
looped-hinge helix DNA binding protein domain protein, AbrB family
anamox1_curated_scaffold_1951_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9246..9995
DNA (750bp) protein (250aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000381392B
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAI07256.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
anamox1_curated_scaffold_1951_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9992..11197
DNA (1206bp) protein (402aa)
Putative beta-oxoacyl-CoA thiolase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P604_AROAE
beta-oxoacyl-CoA thiolase
Tax=RBG_16_Betaproteobacteria_66_20_curated
anamox1_curated_scaffold_1951_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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11217..12788
DNA (1572bp) protein (524aa)
Putative ADP-producing CoA ligase,similar to feruloyl-CoA synthetase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P603_AROAE
fcs; ADP-producing CoA ligase, feruloyl-CoA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_1951_16
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12785..14890
DNA (2106bp) protein (702aa)
hydantoin utilization protein A Tax=Azoarcus toluclasticus RepID=UPI000377D2B4
hyuA; hydantoin utilization protein A
Hydantoin utilization protein A {ECO:0000313|EMBL:CAI07259.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
anamox1_curated_scaffold_1951_17
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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14905..16491
DNA (1587bp) protein (529aa)
hydantoin utilization protein B Tax=Azoarcus toluclasticus RepID=UPI000380B546
hyuB; hydantoin utilization protein B
Hydantoin utilization protein B {ECO:0000313|EMBL:CAI07261.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
Displaying 17 items

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