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anamox1_curated_scaffold_1254

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1254_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..141)
DNA (141bp) protein (47aa)
Electron transport complex, RnfABCDGE type, B subunit Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BJ5_POLSJ
RnfABCDGE type electron transport complex subunit B
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:ABE44097.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
anamox1_curated_scaffold_1254_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(138..1421)
DNA (1284bp) protein (428aa)
phaZ; putative polyhydroxyalkanoate depolymerase PhaZ (EC:3.1.1.-)
Putative polyhydroxyalkanoate depolymerase PhaZ {ECO:0000313|EMBL:BAL94878.1}; EC=3.1.1.- {ECO:0000313|EMBL:BAL94878.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative polyhydroxyalkanoate depolymerase PhaZ Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE1_RUBGI
anamox1_curated_scaffold_1254_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1692..2903)
DNA (1212bp) protein (404aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAL94879.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAL94879.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Aminotransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE2_RUBGI
anamox1_curated_scaffold_1254_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3049..5211
DNA (2163bp) protein (721aa)
UvrABC system protein B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS46_9BURK
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
uvrB; UvrABC system protein B
anamox1_curated_scaffold_1254_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5208..5774
DNA (567bp) protein (189aa)
ptpA; putative protein-tyrosine phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS47_9BURK
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EGJ11165.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1254_6
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5926..6459
DNA (534bp) protein (178aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI30_METPP
BadM/Rrf2 family transcriptional regulator
HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EWS55757.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
anamox1_curated_scaffold_1254_7
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6530..7690
DNA (1161bp) protein (387aa)
iscS; Cysteine desulfurase (ThiI transpersulfidase) (NifS protein homolog) (EC:2.8.1.7)
cysteine desulfurase Tax=Caldimonas manganoxidans RepID=UPI00037E0E00
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_1254_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7707..8030
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY Tax=Ideonella sp. B508-1 RepID=UPI000348CF11
iron-sulfur cluster assembly protein IscA
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:ACB33314.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_1254_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8166..9842)
DNA (1677bp) protein (559aa)
Membrane-bound lytic murein transglycosylase D MltD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC8_RUBGI
mltD; membrane-bound lytic murein transglycosylase D MltD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1254_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9839..10609)
DNA (771bp) protein (257aa)
gloB; hydroxyacylglutathione hydrolase GloB (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Hydroxyacylglutathione hydrolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC7_RUBGI
anamox1_curated_scaffold_1254_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10635..11396
DNA (762bp) protein (254aa)
Putative methyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC6_RUBGI
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL96613.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1254_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11393..11830
DNA (438bp) protein (146aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX7_9BURK
anamox1_curated_scaffold_1254_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11898..13127
DNA (1230bp) protein (410aa)
RND family efflux transporter MFP subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX6_9BURK
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EGJ11094.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
multidrug efflux transporter
anamox1_curated_scaffold_1254_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13166..16276
DNA (3111bp) protein (1037aa)
Transporter, AcrB/D/F family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC3_RUBGI
Transporter, AcrB/D/F family protein {ECO:0000313|EMBL:BAL96610.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
transporter, AcrB/D/F family protein
anamox1_curated_scaffold_1254_15
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16294..17457)
DNA (1164bp) protein (388aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
molybdenum cofactor biosynthesis protein MoeA Tax=Caldimonas manganoxidans RepID=UPI00036A69D0
moaA; molybdenum cofactor biosynthesis protein A
anamox1_curated_scaffold_1254_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17475..18179)
DNA (705bp) protein (235aa)
Putative C40 family peptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUB9_RUBGI
putative C40 family peptidase
Putative C40 family peptidase {ECO:0000313|EMBL:BAL96606.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1254_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18391..20307
DNA (1917bp) protein (639aa)
Propionate--CoA ligase PrpE {ECO:0000313|EMBL:BAL96604.1}; EC=6.2.1.17 {ECO:0000313|EMBL:BAL96604.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
prpE; propionate--CoA ligase PrpE (EC:6.2.1.17)
Propionate--CoA ligase PrpE Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUB7_RUBGI
anamox1_curated_scaffold_1254_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20356..22059)
DNA (1704bp) protein (568aa)
PhoH family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUB5_RUBGI
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:BAL96602.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1254_19
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22184..22660)
DNA (477bp) protein (159aa)
Putative peroxiredoxin bcp {ECO:0000313|EMBL:EWS52805.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EWS52805.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Putative bacterioferritin comigratory oxidoreductase protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG11_METPP
bacterioferritin comigratory oxidoreductase
anamox1_curated_scaffold_1254_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22789..23169)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW28_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ12546.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1254_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23279..24511
DNA (1233bp) protein (411aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EGJ12547.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EGJ12547.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Aminotransferase AlaT Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW29_9BURK
aminotransferase
anamox1_curated_scaffold_1254_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24525..25859
DNA (1335bp) protein (445aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW30_9BURK
anamox1_curated_scaffold_1254_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25856..27277
DNA (1422bp) protein (474aa)
Threonine synthase {ECO:0000313|EMBL:EGJ12549.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EGJ12549.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW31_9BURK
anamox1_curated_scaffold_1254_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27285..28532
DNA (1248bp) protein (416aa)
Molybdenum cofactor synthesis domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1J0_LEPCP
molybdenum cofactor synthesis domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1254_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28529..28780
DNA (252bp) protein (84aa)
Molybdopterin synthase subunit MoaD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA8_RUBGI
moaD; molybdopterin synthase subunit MoaD
Molybdopterin synthase subunit MoaD {ECO:0000313|EMBL:BAL96595.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1254_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28838..29347
DNA (510bp) protein (170aa)
molybdenum cofactor biosynthesis protein MoaE Tax=Ideonella sp. B508-1 RepID=UPI0003B62B16
moaE; molybdopterin converting factor subunit 2
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1254_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29356..29919
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW35_9BURK
flavin reductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1254_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29986..31437
DNA (1452bp) protein (484aa)
clpB; ATP-dependent Clp protease ATP-binding subunit ClpB (EC:3.4.21.-)
ATP-dependent chaperone ClpB Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW36_9BURK
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Displaying 28 items

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