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anamox1_curated_scaffold_2131

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2131_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1849)
DNA (1848bp) protein (616aa)
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Tax=Ideonella sp. B508-1 RepID=UPI00034C02B8
anamox1_curated_scaffold_2131_2
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2145..2858)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034A36D8
putative signal peptide protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_2131_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2965..3978)
DNA (1014bp) protein (338aa)
Putative lyase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH7_RUBGI
putative lyase
Putative lyase {ECO:0000313|EMBL:BAL94564.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2131_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4017..5003)
DNA (987bp) protein (329aa)
malate dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI0003657F7C
malate/lactate dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_2131_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5110..5883
DNA (774bp) protein (258aa)
Transcriptional regulator, GntR family Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH9_RUBGI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:BAL94566.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2131_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6037..6459
DNA (423bp) protein (141aa)
sdhC; succinate dehydrogenase cytochrome b556 subunit SdhC (EC:1.3.99.1)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000375A3D3
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ACB34971.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_2131_7
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6478..6840
DNA (363bp) protein (121aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ABM95125.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABM95125.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
succinate dehydrogenase Tax=Ideonella sp. B508-1 RepID=UPI00034A3FA1
anamox1_curated_scaffold_2131_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6851..8647
DNA (1797bp) protein (599aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase, flavoprotein subunit Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y899_LEPCP
anamox1_curated_scaffold_2131_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8676..9380
DNA (705bp) protein (235aa)
sdhB; succinate dehydrogenase iron-sulfur subunit SdhB (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
succinate dehydrogenase iron-sulfur subunit Tax=Caldimonas manganoxidans RepID=UPI000373DC42
anamox1_curated_scaffold_2131_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9426..9707
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNI4_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94571.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2131_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9723..11033
DNA (1311bp) protein (437aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
gltA; citrate synthase GltA (EC:2.3.3.1)
Citrate synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQK9_9BURK
anamox1_curated_scaffold_2131_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11040..11975
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQK8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10626.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_2131_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12032..13384)
DNA (1353bp) protein (451aa)
Putative amino acid aldolase/racemase Tax=Variovorax paradoxus B4 RepID=T1X7T1_VARPD
putative amino acid aldolase/racemase
Putative amino acid aldolase/racemase {ECO:0000313|EMBL:AGU48394.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_2131_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13414..14076)
DNA (663bp) protein (221aa)
Transcriptional regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQX6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EHR72756.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
GntR family transcriptional regulator
anamox1_curated_scaffold_2131_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14259..15179
DNA (921bp) protein (307aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EGJ10622.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EGJ10622.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQK4_9BURK
Displaying 15 items

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