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anamox1_curated_scaffold_292

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_292_1
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..857
DNA (855bp) protein (285aa)
Chaperone protein DnaK Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSR4_RUBGI
dnaK; chaperone protein DnaK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

968..2095
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV97_9BURK
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
dnaJ; molecular chaperone DnaJ
anamox1_curated_scaffold_292_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2088..3353)
DNA (1266bp) protein (422aa)
DNA repair photolyase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRB4_9BURK
DNA repair photolyase {ECO:0000313|EMBL:EHR71734.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
radical SAM family protein
anamox1_curated_scaffold_292_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3432..4844)
DNA (1413bp) protein (471aa)
dnaB; replicative DNA helicase DnaB (EC:3.6.4.12)
Replicative DNA helicase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV94_9BURK
Replicative DNA helicase {ECO:0000313|EMBL:EGJ12262.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_292_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5025..5477)
DNA (453bp) protein (151aa)
50S ribosomal protein L9 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRB6_9BURK
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rplI; 50S ribosomal protein L9
anamox1_curated_scaffold_292_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5491..5781)
DNA (291bp) protein (97aa)
30S ribosomal protein S18 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS0_RUBGI
rpsR; 30S ribosomal protein S18 RpsR
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_292_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5762..6136)
DNA (375bp) protein (125aa)
Primosomal replication protein N Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV92_9BURK
priB; primosomal replication protein N PriB
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6183..6545)
DNA (363bp) protein (121aa)
30S ribosomal protein S6 Tax=Ideonella sp. B508-1 RepID=UPI00034D62DF
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_292_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6692..9103)
DNA (2412bp) protein (804aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphoenolpyruvate synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS4_RUBGI
anamox1_curated_scaffold_292_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9317..10141
DNA (825bp) protein (275aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Putative phosphoenolpyruvate synthase regulatory protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV88_9BURK
putative phosphotransferase
anamox1_curated_scaffold_292_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10170..10955)
DNA (786bp) protein (262aa)
tRNA/rRNA methyltransferase protein (EC:2.1.1.-)
tRNA/rRNA methyltransferase protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS6_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10960..11583)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII Tax=Ideonella sp. B508-1 RepID=UPI0003B655E3
anamox1_curated_scaffold_292_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11555..12673)
DNA (1119bp) protein (373aa)
lpxB; lipid-A-disaccharide synthase LpxB (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Lipid-A-disaccharide synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS8_RUBGI
anamox1_curated_scaffold_292_14
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12726..13514)
DNA (789bp) protein (263aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00387}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000255|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000255|HAMAP-Rule:MF_00387};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=LPXA_LEPCP
anamox1_curated_scaffold_292_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13558..14007)
DNA (450bp) protein (150aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRC6_9BURK
anamox1_curated_scaffold_292_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14004..15035)
DNA (1032bp) protein (344aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRC7_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15060..15578)
DNA (519bp) protein (173aa)
Putative transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV81_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EGJ12249.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ompH; outer membrane chaperone Skp
anamox1_curated_scaffold_292_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15578..17884)
DNA (2307bp) protein (769aa)
Outer membrane protein assembly factor BamA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HST3_RUBGI
yaeT; outer membrane protein assembly factor YaeT
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17898..19268)
DNA (1371bp) protein (457aa)
ecfE; regulator of sigma E protease RseP (EC:3.4.24.-)
RIP metalloprotease RseP Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRD0_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_20
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19269..20456)
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH92_METPP
anamox1_curated_scaffold_292_21
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20474..21310)
DNA (837bp) protein (279aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRD2_9BURK
anamox1_curated_scaffold_292_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21316..22056)
DNA (741bp) protein (247aa)
uppS; undecaprenyl pyrophosphate synthetase UppS (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Isoprenyl transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV76_9BURK
anamox1_curated_scaffold_292_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22070..22636)
DNA (567bp) protein (189aa)
Ribosome-recycling factor Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRD4_9BURK
rrf; ribosome recycling factor Rrf
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_292_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22652..23362)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
uridylate kinase Tax=Ideonella sp. B508-1 RepID=UPI0003494B08
anamox1_curated_scaffold_292_25
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23454..24350)
DNA (897bp) protein (299aa)
endo-1,4-D-glucanase Tax=Caldimonas manganoxidans RepID=UPI0003707910
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
tsf; elongation factor Ts
anamox1_curated_scaffold_292_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24483..25322)
DNA (840bp) protein (280aa)
30S ribosomal protein S2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU1_RUBGI
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_292_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25478..27103
DNA (1626bp) protein (542aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU4_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_292_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27149..29347)
DNA (2199bp) protein (733aa)
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribonuclease R Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU5_RUBGI
anamox1_curated_scaffold_292_trna_1
unknown

Not on your lists

29461..29542
DNA (82bp)
transferRNA Leu
anamox1_curated_scaffold_292_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29747..30268)
DNA (522bp) protein (174aa)
Putative transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV67_9BURK
Putative transferase {ECO:0000313|EMBL:EGJ12235.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
Displaying items 1-30 of 133 in total

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