ggKbase home page

anamox1_curated_scaffold_739

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_739_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155..985)
-----------------
DNA (831bp)
protein (277aa)
Molybdate ABC transporter periplasmic molybdate-binding protein Tax=Oceanibaculum indicum P24 RepID=K2K0W6_9PROT
Molybdate ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:EKE76439.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
molybdate ABC transporter periplasmic molybdate-binding protein
anamox1_curated_scaffold_739_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1073..3265
-----------------
DNA (2193bp)
protein (731aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
UvrD/Rep helicase family protein 1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HG12_ACHXA
UvrD/Rep helicase family protein 1
anamox1_curated_scaffold_739_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3272..4147)
-----------------
DNA (876bp)
protein (292aa)
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 6 (EC:1.1.1.-)
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 6 {ECO:0000313|EMBL:ADP17981.1}; EC=1.1.1.- {ECO:0000313|EMBL:ADP17981.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 6 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJ81_ACHXA
anamox1_curated_scaffold_739_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4426..5232
-----------------
DNA (807bp)
protein (269aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKW4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73707.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_739_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5303..5968
-----------------
DNA (666bp)
protein (222aa)
type 11 methyltransferase bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEB85729.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
anamox1_curated_scaffold_739_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6015..6731)
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDH1_9BRAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHX13765.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox1_curated_scaffold_739_trna_1
unknown

Not on your lists

comp(6901..6974)
-----------------
DNA (74bp)
transferRNA Pro
anamox1_curated_scaffold_739_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7003..7551)
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU87_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96574.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_739_8
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..8060)
-----------------
DNA (495bp)
protein (165aa)
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
Regulator of ribonuclease activity A Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG34_METPP
ribonuclease activity regulator protein RraA
anamox1_curated_scaffold_739_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8222..9952)
-----------------
DNA (1731bp)
protein (577aa)
Acetolactate synthase large subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW46_9BURK
putative acetolactate synthase large subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_739_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10038..11264)
-----------------
DNA (1227bp)
protein (409aa)
Sugar phosphate permease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WID2_9BURK
Sugar phosphate permease {ECO:0000313|EMBL:EHR71345.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
major facilitator superfamily transporter
anamox1_curated_scaffold_739_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11337..12161
-----------------
DNA (825bp)
protein (275aa)
AraC family transcriptional regulator Tax=Acidovorax radicis RepID=UPI0002377FBB
araC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFU43837.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox1_curated_scaffold_739_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12294..13406
-----------------
DNA (1113bp)
protein (371aa)
nadA; quinolinate synthetase NadA (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
quinolinate synthetase Tax=Caldimonas manganoxidans RepID=UPI0003609C97
anamox1_curated_scaffold_739_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13502..13792
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU96_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96583.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_739_14
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13902..15539)
-----------------
DNA (1638bp)
protein (546aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
nadB; L-aspartate oxidase NadB (EC:1.4.3.16)
L-aspartate oxidase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIC7_9BURK
anamox1_curated_scaffold_739_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15667..16989
-----------------
DNA (1323bp)
protein (441aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA4_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96591.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_739_16
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17122..18042)
-----------------
DNA (921bp)
protein (307aa)
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1)
Phenylalanine 4-hydroxylase {ECO:0000313|EMBL:ABM36433.1}; EC=1.14.16.1 {ECO:0000313|EMBL:ABM36433.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Phenylalanine 4-hydroxylase Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLA5_POLNA
anamox1_curated_scaffold_739_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18047..18364)
-----------------
DNA (318bp)
protein (106aa)
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H58_POLSJ
anamox1_curated_scaffold_739_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18478..19749)
-----------------
DNA (1272bp)
protein (424aa)
Putative cytochromre c biogenesis protein CcmI Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRB8_RUBGI
ccmI; putative cytochromre c biogenesis protein CcmI
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
anamox1_curated_scaffold_739_19
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19746..20318)
-----------------
DNA (573bp)
protein (191aa)
Cytochrome C biogenesis protein Tax=beta proteobacterium CB RepID=M1SIB7_9PROT
Cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AGG34104.1}; species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
anamox1_curated_scaffold_739_20
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20311..20832)
-----------------
DNA (522bp)
protein (174aa)
Periplasmic protein thiol Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9R0_NITMU
periplasmic protein thiol
Tax=GWA2_Gallionellales_60_142_curated
anamox1_curated_scaffold_739_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20875..22854)
-----------------
DNA (1980bp)
protein (660aa)
Cytochrome c-type biogenesis protein CcmF Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q9_NITMU
cytochrome c-type biogenesis protein CcmF
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
anamox1_curated_scaffold_739_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22851..23318)
-----------------
DNA (468bp)
protein (156aa)
Cytochrome c-type biogenesis protein CcmE Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMP3_ACCPU
CcmE/CycJ protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
anamox1_curated_scaffold_739_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23315..23467)
-----------------
DNA (153bp)
protein (51aa)
Putative uncharacterized protein Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D9H1_LARHH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
anamox1_curated_scaffold_739_24
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23470..24219)
-----------------
DNA (750bp)
protein (250aa)
Heme exporter protein CcmC Tax=Sulfuricella denitrificans skB26 RepID=S6ADK5_9PROT
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:BAN36538.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
anamox1_curated_scaffold_739_25
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24265..24927)
-----------------
DNA (663bp)
protein (221aa)
Heme exporter protein B Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJT0_POLNA
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
anamox1_curated_scaffold_739_26
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24924..25613)
-----------------
DNA (690bp)
protein (230aa)
Probable heme exporter protein A Tax=Azoarcus sp. (strain BH72) RepID=A1KCJ6_AZOSB
ccmA; cytochrome c biogenesis protein CcmA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
anamox1_curated_scaffold_739_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25740..26741
-----------------
DNA (1002bp)
protein (334aa)
Transcriptional regulator, AraC family Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR27_RUBGI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:BAL95464.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_739_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26916..27884
-----------------
DNA (969bp)
protein (323aa)
Cytochrome C family protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP72_9BURK
Cytochrome C family protein {ECO:0000313|EMBL:EGJ10140.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mtrA; decaheme cytochrome c MtrA/PioA
anamox1_curated_scaffold_739_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27906..30743
-----------------
DNA (2838bp)
protein (946aa)
Outer membrane protein MtrB/PioB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR25_RUBGI
mtrB; outer membrane protein MtrB/PioB
Outer membrane protein MtrB/PioB {ECO:0000313|EMBL:BAL95462.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 1-30 of 33 in total

View Taxonomy