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anamox1_curated_scaffold_351

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_351_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
NMT1/THI5-like domain-containing protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMD0_9BURK
NMT1/THI5-like domain-containing protein {ECO:0000313|EMBL:EGJ09498.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
NMT1/THI5 like domain-containing protein
anamox1_curated_scaffold_351_2
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(569..826)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Sagittula stellata E-37 RepID=A3K475_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA08339.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
anamox1_curated_scaffold_351_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1240..2010
DNA (771bp) protein (257aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS61_9BURK
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EHR72858.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ABC transporter permease
anamox1_curated_scaffold_351_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2050..2751)
DNA (702bp) protein (234aa)
Putative signal peptide protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXS4_RUBGI
putative signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:BAL97811.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_351_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2753..3628)
DNA (876bp) protein (292aa)
biotin acetyl-CoA-carboxylase synthetase (EC:6.3.4.15)
Biotin acetyl-CoA-carboxylase synthetase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCD6_METPP
Bifunctional protein BirA {ECO:0000313|EMBL:EWS59790.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
anamox1_curated_scaffold_351_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3651..4166)
DNA (516bp) protein (172aa)
SET domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXS2_RUBGI
SET domain-containing protein
SET domain protein {ECO:0000313|EMBL:BAL97809.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_351_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4264..5715
DNA (1452bp) protein (484aa)
topB; DNA topoisomerase III TopB (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA topoisomerase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXS1_RUBGI
anamox1_curated_scaffold_351_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5712..6818
DNA (1107bp) protein (369aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
topB; DNA topoisomerase III TopB (EC:5.99.1.2)
DNA topoisomerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLH2_9BURK
anamox1_curated_scaffold_351_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6832..7827
DNA (996bp) protein (332aa)
Putative permease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVU6_9BURK
MdcF malonate transporter
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_351_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7888..9162
DNA (1275bp) protein (425aa)
proA; glutamate-5-semialdehyde dehydrogenase ProA (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLG8_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_351_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9219..9761
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLG7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09185.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
LemA family protein
anamox1_curated_scaffold_351_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9849..10160)
DNA (312bp) protein (104aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI0003176AEF
cytochrome c class I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
anamox1_curated_scaffold_351_13
unknown

Not on your lists

comp(10416..10649)
DNA (234bp) protein (78aa)

This feature has no annotations

anamox1_curated_scaffold_351_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11553)
DNA (840bp) protein (280aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNE5_9BURK
protocatechuate 4,5-dioxygenase beta chain
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_351_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11574..11921)
DNA (348bp) protein (116aa)
Protocatechuate 4,5-dioxygenase (4,5-PCD), alpha chain {ECO:0000313|EMBL:CCE07937.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CCE07937.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase (4,5-PCD), alpha chain Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN99_9BRAD
anamox1_curated_scaffold_351_16
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12275..12994
DNA (720bp) protein (240aa)
Transcriptional regulator, LysR family Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5Q5_LEPCP
LysR family transcriptional regulator
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:CCD86657.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
anamox1_curated_scaffold_351_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12972..13544)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11782.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_351_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13697..13936
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ37_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_351_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13908..14363
DNA (456bp) protein (152aa)
Putative nucleic-acid-binding protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ36_9BURK
Putative nucleic-acid-binding protein {ECO:0000313|EMBL:EHR73255.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PilT domain-containing protein
anamox1_curated_scaffold_351_20
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14360..15448
DNA (1089bp) protein (363aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Histidinol-phosphate aminotransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX74_LEPCP
histidinol-phosphate aminotransferase
anamox1_curated_scaffold_351_21
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15464..16063
DNA (600bp) protein (200aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000255|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000255|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000255|HAMAP-Rule:MF_00076};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Imidazoleglycerol-phosphate dehydratase Tax=Methylibium petroleiphilum (strain PM1) RepID=HIS7_METPP
anamox1_curated_scaffold_351_22
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16137..16784
DNA (648bp) protein (216aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Imidazole glycerol phosphate synthase subunit HisH Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE07_METPP
anamox1_curated_scaffold_351_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16874..17620
DNA (747bp) protein (249aa)
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMG7_RUBGI
anamox1_curated_scaffold_351_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..18399
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTS2_9BURK
anamox1_curated_scaffold_351_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18396..18986
DNA (591bp) protein (197aa)
putative RNA methyltransferase (EC:2.1.1.-)
Putative methylase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTS3_9BURK
Putative methylase {ECO:0000313|EMBL:EGJ11741.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_351_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18983..19483
DNA (501bp) protein (167aa)
kdtB; pantetheine-phosphate adenylyltransferase KdtB (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphopantetheine adenylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMH0_RUBGI
anamox1_curated_scaffold_351_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19540..20010)
DNA (471bp) protein (157aa)
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_351_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20007..20708)
DNA (702bp) protein (234aa)
pth; peptidyl-tRNA hydrolase Pth (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Peptidyl-tRNA hydrolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMH3_RUBGI
anamox1_curated_scaffold_351_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20856..21503)
DNA (648bp) protein (216aa)
50S ribosomal protein L25 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTS8_9BURK
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rplY; 50S ribosomal protein L25
anamox1_curated_scaffold_351_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21578..22540)
DNA (963bp) protein (321aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTS9_9BURK
Displaying items 1-30 of 78 in total

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