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anamox1_curated_scaffold_497

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Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_497_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93..1904)
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Elongation factor 4 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNF4_9BURK
lepA; elongation factor 4
anamox1_curated_scaffold_497_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2444..3925)
DNA (1482bp) protein (494aa)
Periplasmic serine protease, Do/DeqQ family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSA3_9BURK
mucD; serine protease MucD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_497_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4033..4938)
DNA (906bp) protein (302aa)
Sigma-E factor negative regulatory protein RseB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWQ4_RUBGI
rseB; sigma-E factor negative regulatory protein RseB
Sigma-E factor negative regulatory protein RseB {ECO:0000313|EMBL:BAL97441.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_497_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5088..5819)
DNA (732bp) protein (244aa)
Putative anti sigma-E protein, RseA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWQ5_RUBGI
rseA; putative anti sigma-E protein, RseA
Putative anti sigma-E protein, RseA {ECO:0000313|EMBL:BAL97442.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_497_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5860..6471)
DNA (612bp) protein (204aa)
RNA polymerase sigma factor Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNM0_9BURK
ECF subfamily RNA polymerase sigma-70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_497_6
unknown

Not on your lists

comp(6464..6916)
DNA (453bp) protein (151aa)

This feature has no annotations

anamox1_curated_scaffold_497_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6923..8170)
DNA (1248bp) protein (416aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II, FabF (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
3-oxoacyl-ACP synthase Tax=Caldimonas manganoxidans RepID=UPI0003711C11
anamox1_curated_scaffold_497_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8179..8418)
DNA (240bp) protein (80aa)
Acyl carrier protein Tax=Rubrivivax RepID=I0HWQ9_RUBGI
acpP; acyl carrier protein AcpP
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_497_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8529..9311)
DNA (783bp) protein (261aa)
3-ketoacyl-ACP reductase Tax=Ideonella sp. B508-1 RepID=UPI0003468427
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACB32884.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_497_10
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9308..10246)
DNA (939bp) protein (313aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDG0_METPP
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_497_11
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10322..11311)
DNA (990bp) protein (330aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDF9_METPP
anamox1_curated_scaffold_497_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11308..12408)
DNA (1101bp) protein (367aa)
phosphate acyltransferase Tax=Caldimonas manganoxidans RepID=UPI0003697EDD
glycerol-3-phosphate acyltransferase PlsX
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_497_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12483..12665)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL32_LEPCP
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_497_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12827..13378)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWR5_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97452.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_497_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13420..14019
DNA (600bp) protein (200aa)
Maf-like protein RBXJA2T_06455 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNN0_9BURK
Maf-like protein RBXJA2T_06455 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_497_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14016..14783
DNA (768bp) protein (256aa)
Putative transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNN1_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EGJ09949.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
tetrapyrrole methylase family protein
anamox1_curated_scaffold_497_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14804..16138)
DNA (1335bp) protein (445aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
Putative ATP-dependent RNA helicase 2 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNN3_9BURK
Putative ATP-dependent RNA helicase 2 {ECO:0000313|EMBL:EGJ09951.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_497_18
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16350..17429
DNA (1080bp) protein (360aa)
Glycosyl transferase, family 2 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIV6_BURVG
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABO56209.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
anamox1_curated_scaffold_497_19
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17537..18433
DNA (897bp) protein (299aa)
Rhamnosyltransferase Tax=Burkholderia cepacia GG4 RepID=J7J682_BURCE
rhamnosyltransferase
Rhamnosyltransferase {ECO:0000313|EMBL:AFQ49742.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
anamox1_curated_scaffold_497_20
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18430..19686
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Janthinobacterium lividum RepID=UPI0002889208
lipid A core - O-antigen ligase and related enzymes
Lipid A core-O-antigen ligase and related enzymes {ECO:0000313|EMBL:BAO80182.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_497_21
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19683..22991
DNA (3309bp) protein (1103aa)
Methyltransferase type 12 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5K2_NITWC
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ADJ28179.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
anamox1_curated_scaffold_497_22
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22958..24415)
DNA (1458bp) protein (486aa)
Glycosyltransferase Tax=Burkholderia thailandensis RepID=G3LYM0_BURTH
glycosyl transferase 2 family protein
Glycosyltransferase {ECO:0000313|EMBL:AEO78455.1}; Putative glycosyltransferase {ECO:0000313|EMBL:AEO78439.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis.;"
anamox1_curated_scaffold_497_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24495..25340)
DNA (846bp) protein (282aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
PpiC-type peptidyl-prolyl cis-trans isomerase
anamox1_curated_scaffold_497_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25526..27382)
DNA (1857bp) protein (619aa)
Putative uncharacterized protein Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ1_ACIAC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox1_curated_scaffold_497_25
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27607..28029)
DNA (423bp) protein (141aa)
Putative uncharacterized protein Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q479_ACIAP
Uncharacterized protein {ECO:0000313|EMBL:KJA11986.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
anamox1_curated_scaffold_497_26
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28066..30321)
DNA (2256bp) protein (752aa)
General secretion pathway protein D Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFQ3_VEREI
general secretion pathway protein D
General secretion pathway protein D {ECO:0000313|EMBL:ABM56460.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
anamox1_curated_scaffold_497_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30337..31014)
DNA (678bp) protein (226aa)
Putative uncharacterized protein Tax=Acidovorax sp. NO-1 RepID=H0BSZ7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24491.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
anamox1_curated_scaffold_497_28
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31016..31573)
DNA (558bp) protein (186aa)
General secretion pathway protein M Tax=Acidovorax sp. NO-1 RepID=H0BSZ6_9BURK
General secretion pathway protein M {ECO:0000313|EMBL:EHL24490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
general secretion pathway protein M
anamox1_curated_scaffold_497_29
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31570..32730)
DNA (1161bp) protein (387aa)
Fimbrial assembly family protein Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TUQ6_ACIAC
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABM34694.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
anamox1_curated_scaffold_497_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32711..33601)
DNA (891bp) protein (297aa)
General secretory pathway protein K Tax=Acidovorax sp. NO-1 RepID=H0BSZ4_9BURK
General secretory pathway protein K {ECO:0000313|EMBL:EHL24488.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
general secretory pathway protein K
Displaying items 1-30 of 110 in total

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