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anamox1_curated_scaffold_270

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_270_1
unknown

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3..104
DNA (102bp) protein (34aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI0003B5DE7A
anamox1_curated_scaffold_270_2
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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504..893
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DP5_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:ABE43347.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
hypothetical protein
anamox1_curated_scaffold_270_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1017..1352)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNS8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94665.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_270_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1373..2932)
DNA (1560bp) protein (520aa)
Putative serine/threonine protein kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNS9_RUBGI
putative serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:EGJ10809.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_270_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2991..3740)
DNA (750bp) protein (250aa)
Metallophosphoesterase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR40_9BURK
putative metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:EGJ10808.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_270_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3737..4483)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI0002EC91FA
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_270_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4582..4983
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWE1_Burkholderiales_65_30 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_270_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4976..7894
DNA (2919bp) protein (973aa)
Putative ATPase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVQ1_9BURK
Putative ATPase {ECO:0000313|EMBL:EHR69694.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
transcriptional activator domain-containing protein
anamox1_curated_scaffold_270_9
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7895..8572)
DNA (678bp) protein (226aa)
C-type lectin domain protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PJF8_MURRD
C-type lectin domain-containing protein
C-type lectin domain protein {ECO:0000313|EMBL:AEM70885.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
anamox1_curated_scaffold_270_10
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8695..9873)
DNA (1179bp) protein (393aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AGH87418.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AGH87418.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
Cyclopropane-fatty-acyl-phospholipid synthase Tax=Ralstonia solanacearum RepID=M4UM75_RALSL
anamox1_curated_scaffold_270_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10310..11401
DNA (1092bp) protein (364aa)
hpd; 4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU20_9BURK
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EGJ11838.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_270_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11423..12352)
DNA (930bp) protein (310aa)
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ornithine carbamoyltransferase, catabolic Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNT6_RUBGI
anamox1_curated_scaffold_270_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12349..13563)
DNA (1215bp) protein (405aa)
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acetylornithine aminotransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNT7_RUBGI
anamox1_curated_scaffold_270_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13878..14219
DNA (342bp) protein (114aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM39_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71924.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_270_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14336..14638)
DNA (303bp) protein (101aa)
30S ribosomal protein S20 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM38_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rpsT; 30S ribosomal protein S20
anamox1_curated_scaffold_270_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14763..16319
DNA (1557bp) protein (519aa)
Integral membrane protein MviN Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR31_9BURK
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mviN; integral membrane protein MviN
anamox1_curated_scaffold_270_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16476..17150
DNA (675bp) protein (225aa)
DnaA-homolog protein Hda Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU2_RUBGI
hda; DnaA-like protein Hda
DnaA-homolog protein Hda {ECO:0000313|EMBL:BAL94679.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_270_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17147..17815
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10796.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative phosphatase
anamox1_curated_scaffold_270_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17812..19518
DNA (1707bp) protein (569aa)
pcnB; poly(A) polymerase PcnB (EC:2.7.7.19)
Poly(A) polymerase (Fragment) Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR27_9BURK
Poly(A) polymerase {ECO:0000313|EMBL:EGJ10795.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_270_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19739..20386
DNA (648bp) protein (216aa)
Phosphate transport regulator related to PhoU Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM29_9BURK
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:EHR71914.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_270_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20418..21428
DNA (1011bp) protein (337aa)
Phosphate transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN28_9BURK
Phosphate transporter {ECO:0000313|EMBL:EGJ09746.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pit; putative low-affinity inorganic phosphate transporter Pit
anamox1_curated_scaffold_270_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21474..21905)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU9_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_270_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22120..22368
DNA (249bp) protein (83aa)
30S ribosomal protein S16 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV1_RUBGI
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_270_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22395..23042
DNA (648bp) protein (216aa)
Ribosome maturation factor RimM Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV2_RUBGI
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_270_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23061..23810
DNA (750bp) protein (250aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM24_9BURK
trmD; tRNA (guanine-N1-)-methyltransferase TrmD
anamox1_curated_scaffold_270_26
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23890..24243
DNA (354bp) protein (118aa)
50S ribosomal protein L19 Tax=Caldimonas manganoxidans RepID=UPI00036787D1
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_270_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24457..25158
DNA (702bp) protein (234aa)
NUDIX hydrolase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0H9_LEPCP
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACB32960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_270_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25192..26229
DNA (1038bp) protein (346aa)
cbiB; cobalamin biosynthesis protein CbiB (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV6_RUBGI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_270_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26241..27185)
DNA (945bp) protein (315aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative ribosome biogenesis GTPase RsgA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV7_RUBGI
anamox1_curated_scaffold_270_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27211..28494)
DNA (1284bp) protein (428aa)
Ste24 endopeptidase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN37_9BURK
Ste24 endopeptidase {ECO:0000313|EMBL:EGJ09755.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative M48A family peptidase
Displaying items 1-30 of 62 in total

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