ggKbase home page

anamox1_curated_scaffold_848

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_848_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..868
DNA (867bp) protein (289aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
enolase Tax=Caldimonas manganoxidans RepID=UPI000377817B
anamox1_curated_scaffold_848_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

890..1168
DNA (279bp) protein (93aa)
Cell division protein FtsB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPA2_RUBGI
ftsB; cell division protein FtsB
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1185..1799
DNA (615bp) protein (205aa)
Putative transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS04_9BURK
Putative transporter {ECO:0000313|EMBL:EGJ11122.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_848_4
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1894..5037)
DNA (3144bp) protein (1048aa)
TPR repeat protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R380_STRVP
Uncharacterized protein {ECO:0000313|EMBL:KJY20602.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
TPR repeat protein
anamox1_curated_scaffold_848_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5034..5936)
DNA (903bp) protein (301aa)
V8-like Glu-specific endopeptidase Tax=Opitutaceae bacterium TAV5 RepID=H1IZ29_9BACT
serine peptidase
Serine peptidase {ECO:0000313|EMBL:AHF89906.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
anamox1_curated_scaffold_848_6
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5964..7760)
DNA (1797bp) protein (599aa)
Peptidase C14 caspase catalytic subunit p20 Tax=Opitutaceae bacterium TAV5 RepID=H1IZ30_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF94144.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
anamox1_curated_scaffold_848_7
unknown

Not on your lists

8004..8267
DNA (264bp) protein (88aa)

This feature has no annotations

anamox1_curated_scaffold_848_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8260..8898
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPA0_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94837.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8852..9826)
DNA (975bp) protein (325aa)
Hsp33 chaperonin Tax=Ideonella sp. B508-1 RepID=UPI000346AD02
redox regulated molecular chaperone heat-shock-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_848_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9846..10370)
DNA (525bp) protein (175aa)
Putative transferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP98_RUBGI
putative transferase
Putative transferase {ECO:0000313|EMBL:BAL94835.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10441..11256
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP97_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94834.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11312..12547
DNA (1236bp) protein (412aa)
Major facilitator transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUI4_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EGJ12002.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
major facilitator superfamily protein
anamox1_curated_scaffold_848_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12578..13357)
DNA (780bp) protein (260aa)
3'(2'),5'-bisphosphate nucleotidase Tax=Thauera sp. (strain MZ1T) RepID=C4ZNJ2_THASP
3'(2'),5'-bisphosphate nucleotidase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ACK54155.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
anamox1_curated_scaffold_848_14
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13459..13851
DNA (393bp) protein (131aa)
hydroxylase Tax=Cupriavidus sp. WS RepID=UPI00036F3F6B
Hydroxylase {ECO:0000313|EMBL:KJA11203.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothethical protein, DUF59
anamox1_curated_scaffold_848_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13848..14978
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Acidovorax radicis RepID=UPI0002375BCE
Uncharacterized protein {ECO:0000313|EMBL:KJA11202.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
anamox1_curated_scaffold_848_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15151..17238
DNA (2088bp) protein (696aa)
fadB; multifunctional: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM96_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EHR72530.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_848_17
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17231..20479)
DNA (3249bp) protein (1083aa)
Type I restriction enzyme EcoR124II R protein {ECO:0000313|EMBL:EXI67545.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EXI67545.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Type I site-specific deoxyribonuclease, HsdR family Tax=Geobacter sp. (strain M18) RepID=E8WTX8_GEOS8
HsdR family type I site-specific deoxyribonuclease
anamox1_curated_scaffold_848_18
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20489..20779)
DNA (291bp) protein (97aa)
Plasmid stabilization protein ParE Tax=Sphingobium lactosutens DS20 RepID=T0HWJ0_9SPHN
Plasmid stabilization protein ParE {ECO:0000313|EMBL:EQB17442.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
plasmid stabilization protein ParE
anamox1_curated_scaffold_848_19
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..21037)
DNA (249bp) protein (83aa)
addiction module antitoxin Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA642
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD85435.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
anamox1_curated_scaffold_848_20
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21127..21948)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI000375178E
Uncharacterized protein {ECO:0000313|EMBL:GAO37298.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
type-1 restriction enzyme MjaXIP specificity protein
anamox1_curated_scaffold_848_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22365..23984)
DNA (1620bp) protein (540aa)
N-6 DNA methylase Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JS22_9GAMM
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:AEM46530.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
anamox1_curated_scaffold_848_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24208..24918
DNA (711bp) protein (237aa)
TonB family protein Tax=Ideonella sp. B508-1 RepID=UPI000348FA1F
TonB family protein
TonB family protein {ECO:0000313|EMBL:EHR70465.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_848_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25044..25907
DNA (864bp) protein (288aa)
Biopolymer transport protein ExbB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU0_RUBGI
exbB; biopolymer transport protein ExbB
Biopolymer transport protein ExbB {ECO:0000313|EMBL:BAL96777.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25942..26391
DNA (450bp) protein (150aa)
Biopolymer transport protein ExbD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU1_RUBGI
exbD; biopolymer transport protein ExbD
Biopolymer transport protein ExbD {ECO:0000313|EMBL:BAL96778.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26418..26852
DNA (435bp) protein (145aa)
Biopolymer transport protein ExbD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU2_RUBGI
exbD; biopolymer transport protein ExbD
Biopolymer transport protein ExbD {ECO:0000313|EMBL:BAL96779.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27015..28232
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTE8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11616.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_848_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28241..29221
DNA (981bp) protein (327aa)
Putative hydrolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU4_RUBGI
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAL96781.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_848_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29234..30478)
DNA (1245bp) protein (415aa)
Cation/multidrug efflux pump Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVU2_9BURK
transporter, AcrB/D/F family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 28 items

View Taxonomy