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anamox1_curated_scaffold_1676

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1676_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..723)
DNA (723bp) protein (241aa)
orn/lys/arg decarboxylase (EC:4.1.1.-)
Orn/lys/arg decarboxylase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT31_RUBGI
Lysine decarboxylase {ECO:0000313|EMBL:EGJ12500.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1676_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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920..1366
DNA (447bp) protein (149aa)
Putative membrane protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH45_METPP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1676_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1377..2282
DNA (906bp) protein (302aa)
SPFH domain, Band 7 family protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH46_METPP
SPFH domain-containing protein/band 7 family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1676_trna_1
unknown

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2392..2479
DNA (88bp)
transferRNA Ser
anamox1_curated_scaffold_1676_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2795..3610
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AVK4_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJR63638.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
conserved hypothetical protein; putative signal peptide
anamox1_curated_scaffold_1676_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4386..4748)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3HAG0_PSEAC
Helix-turn-helix motif
Tax=BJP_IG2102_Gammaproteobacteria_62_140
anamox1_curated_scaffold_1676_6
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4773..5072)
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RAV1_DESPD
Phage-related protein {ECO:0000313|EMBL:EXI83353.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
anamox1_curated_scaffold_1676_7
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5122..5250)
DNA (129bp) protein (43aa)
Putative type II DNA modification enzyme Tax=Magnetococcus sp. (strain MC-1) RepID=A0L975_MAGSM
type II DNA modification enzyme
Putative type II DNA modification enzyme {ECO:0000313|EMBL:ABK44518.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
anamox1_curated_scaffold_1676_trna_2
unknown

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comp(5326..5399)
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_1676_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5445..6695)
DNA (1251bp) protein (417aa)
Putative porphyrin biosynthesis-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY7_9BURK
Putative porphyrin biosynthesis-like protein {ECO:0000313|EMBL:EGJ12155.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hemY; putative protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
anamox1_curated_scaffold_1676_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6729..7853)
DNA (1125bp) protein (375aa)
hemX; putative uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Putative uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:BAL96984.1}; EC=2.1.1.107 {ECO:0000313|EMBL:BAL96984.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative uroporphyrinogen-III C-methyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVE7_RUBGI
anamox1_curated_scaffold_1676_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7900..8694)
DNA (795bp) protein (265aa)
hemD; uroporphyrinogen-III synthase HemD (EC:4.2.1.75)
Uroporphyrinogen-III synthase HemD {ECO:0000313|EMBL:BAL96985.1}; EC=4.2.1.75 {ECO:0000313|EMBL:BAL96985.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Uroporphyrinogen-III synthase HemD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVE8_RUBGI
anamox1_curated_scaffold_1676_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8732..9679)
DNA (948bp) protein (316aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hemC; porphobilinogen deaminase HemC (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL54_9BURK
anamox1_curated_scaffold_1676_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9755..11416
DNA (1662bp) protein (554aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQI3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1676_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11483..12796)
DNA (1314bp) protein (438aa)
phoR; phosphate regulon sensor protein PhoR (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphate regulon sensor protein PhoR Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUG5_RUBGI
anamox1_curated_scaffold_1676_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12828..13544)
DNA (717bp) protein (239aa)
Two component transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH9_9BURK
Two component transcriptional regulator {ECO:0000313|EMBL:EGJ10597.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
phoB; phosphate regulon transcriptional regulatory protein PhoB
anamox1_curated_scaffold_1676_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13541..14248)
DNA (708bp) protein (236aa)
Phosphate-specific transport system accessory protein PhoU Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH8_9BURK
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
phoU; phosphate transport system protein PhoU
anamox1_curated_scaffold_1676_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14272..15084)
DNA (813bp) protein (271aa)
phosphate transport ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Phosphate transport ATP-binding protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SF98_METPP
anamox1_curated_scaffold_1676_17
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15091..15963)
DNA (873bp) protein (291aa)
Phosphate transport system permease protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SF97_METPP
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:EWS54778.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
pstA; phosphate transporter permease subunit PtsA
anamox1_curated_scaffold_1676_18
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15960..16952)
DNA (993bp) protein (331aa)
Phosphate ABC transporter, inner membrane subunit PstC Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH5_9BURK
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:EYC50827.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
pstC; phosphate ABC transporter permease
anamox1_curated_scaffold_1676_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16990..18027)
DNA (1038bp) protein (346aa)
Phosphate-binding protein PstS Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI79_9BURK
phosphate-binding periplasmic (pbp) ABC transporter protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1676_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18138..19469)
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH2_9BURK
anamox1_curated_scaffold_1676_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19645..20187)
DNA (543bp) protein (181aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ftsH; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH0_9BURK
Displaying 23 items

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