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anamox1_curated_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_445_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..809)
DNA (807bp) protein (269aa)
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Argininosuccinate synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HND0_RUBGI
anamox1_curated_scaffold_445_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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898..2175
DNA (1278bp) protein (426aa)
Putative M16B family peptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK31_RUBGI
putative M16B family peptidase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_445_3
unknown

Not on your lists

comp(2230..2541)
DNA (312bp) protein (104aa)

This feature has no annotations

anamox1_curated_scaffold_445_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2984..4111
DNA (1128bp) protein (376aa)
MFS permease; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Bcr/CflA subfamily drug resistance transporter
Tax=GWE1_Burkholderiales_65_30_curated
anamox1_curated_scaffold_445_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4139..6376)
DNA (2238bp) protein (746aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:AFU43843.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AFU43843.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase Tax=Acidovorax sp. KKS102 RepID=K0HLL8_9BURK
anamox1_curated_scaffold_445_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6816..7037
DNA (222bp) protein (74aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI000382074A
AbrB family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_445_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7037..7435
DNA (399bp) protein (133aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI00035C7FBC
PilT domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_445_8
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7487..8272)
DNA (786bp) protein (262aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
dihydroxynaphthoic acid synthetase (EC:4.1.3.36)
Dihydroxynaphthoic acid synthetase Tax=Ralstonia pickettii DTP0602 RepID=U3R1P1_RALPI
anamox1_curated_scaffold_445_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..9537)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW80_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97267.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_445_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9553..10188)
DNA (636bp) protein (212aa)
Two component LuxR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR98_9BURK
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EGJ10866.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
LuxR family two component transcriptional regulator
anamox1_curated_scaffold_445_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10225..11400)
DNA (1176bp) protein (392aa)
response regulator receiver sensor signal transduction histidine kinase (EC:2.7.13.3)
Response regulator receiver sensor signal transduction histidine kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR99_9BURK
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:EGJ10867.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_445_12
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11584..12054
DNA (471bp) protein (157aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034567DC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_445_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12095..12457
DNA (363bp) protein (121aa)
Chemotaxis protein CheY Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW84_RUBGI
cheY; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:BAL97271.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_445_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12501..14621
DNA (2121bp) protein (707aa)
cheA; chemotaxis sensor histidine kinase CheA (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Chemotaxis sensor histidine kinase CheA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW85_RUBGI
anamox1_curated_scaffold_445_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14722..15243
DNA (522bp) protein (174aa)
CheW protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN4_9BURK
CheW protein {ECO:0000313|EMBL:EGJ11002.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cheW; chemotaxis protein CheW
anamox1_curated_scaffold_445_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15305..17065
DNA (1761bp) protein (587aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI0003687882
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAD20790.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methyl-accepting chemotaxis sensory transducer
anamox1_curated_scaffold_445_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17254..17853
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
NAD(P)H dehydrogenase (quinone) Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI6_HYPDA
flavoprotein WrbA
anamox1_curated_scaffold_445_18

Not on your lists

comp(17886..20498)
DNA (2613bp) protein (871aa)
Efflux ABC transporter permease protein Tax=uncultured microorganism RepID=F8UHZ7_9ZZZZ
Efflux ABC transporter permease protein {ECO:0000313|EMBL:AEI30654.1}; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
anamox1_curated_scaffold_445_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20624..21484
DNA (861bp) protein (287aa)
Extradiol ring-cleavage dioxygenase III subunit B Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW93_RUBGI
extradiol ring-cleavage dioxygenase III subunit B
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_445_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21552..21923
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09521.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_445_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21932..22969)
DNA (1038bp) protein (346aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
add; adenosine deaminase Add (EC:3.5.4.4)
Adenosine deaminase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMF2_9BURK
anamox1_curated_scaffold_445_22
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23029..24102)
DNA (1074bp) protein (358aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B356C7
Uncharacterized protein {ECO:0000313|EMBL:EXI82454.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
anamox1_curated_scaffold_445_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24099..25073)
DNA (975bp) protein (325aa)
Hpr(Ser) kinase/phosphatase {ECO:0000313|EMBL:AAZ47180.1}; EC=2.7.1.- {ECO:0000313|EMBL:AAZ47180.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Hpr(Ser) kinase/phosphatase Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DA1_DECAR
HPr kinase
anamox1_curated_scaffold_445_24
unknown

Not on your lists

comp(25070..25378)
DNA (309bp) protein (103aa)

This feature has no annotations

anamox1_curated_scaffold_445_25
unknown

Not on your lists

comp(25348..25857)
DNA (510bp) protein (170aa)

This feature has no annotations

anamox1_curated_scaffold_445_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26119..26910)
DNA (792bp) protein (264aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAL96783.1}; EC=1.1.1.100 {ECO:0000313|EMBL:BAL96783.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Short-chain dehydrogenase/reductase SDR Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU6_RUBGI
anamox1_curated_scaffold_445_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26942..27586)
DNA (645bp) protein (215aa)
SNARE associated Golgi protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y402_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_445_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27653..29464
DNA (1812bp) protein (604aa)
DNA mismatch repair protein MutL Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP78_RUBGI
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_445_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29515..30552)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWF7_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB33825.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_445_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30681..31292)
DNA (612bp) protein (204aa)
Carbon monoxide dehydrogenase subunit G (CoxG) family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK37_RUBGI
carbon monoxide dehydrogenase subunit G (CoxG) family protein
Carbon monoxide dehydrogenase subunit G (CoxG) family protein {ECO:0000313|EMBL:BAL93374.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 1-30 of 47 in total

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