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anamox1_curated_scaffold_1011

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1011_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..457
DNA (456bp) protein (152aa)
tuf; elongation factor Tu Tuf (EC:3.6.5.3)
Elongation factor Tu Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKY5_RUBGI
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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530..841
DNA (312bp) protein (104aa)
30S ribosomal protein S10 Tax=Comamonadaceae RepID=RS10_ACIAC
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
anamox1_curated_scaffold_1011_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1024..1692
DNA (669bp) protein (223aa)
50S ribosomal protein L3 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKY7_RUBGI
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1695..2315
DNA (621bp) protein (207aa)
50S ribosomal protein L4 Tax=Rubrivivax RepID=I0HKY8_RUBGI
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2312..2641
DNA (330bp) protein (110aa)
50S ribosomal protein L23 Tax=Caldimonas manganoxidans RepID=UPI00035F7119
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rplW; 50S ribosomal protein L23
anamox1_curated_scaffold_1011_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2642..3469
DNA (828bp) protein (276aa)
50S ribosomal protein L2 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL75_9BURK
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3481..3756
DNA (276bp) protein (92aa)
30S ribosomal protein S19 Tax=Rubrivivax RepID=I0HKZ1_RUBGI
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3769..4104
DNA (336bp) protein (112aa)
50S ribosomal protein L22 Tax=Rubrivivax RepID=I0HKZ2_RUBGI
rplV; 50S ribosomal protein L22 RplV
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4121..4981
DNA (861bp) protein (287aa)
30S ribosomal protein S3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL78_9BURK
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_10
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4984..5400
DNA (417bp) protein (139aa)
50S ribosomal protein L16 Tax=Rubrivivax RepID=I0HKZ4_RUBGI
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
anamox1_curated_scaffold_1011_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5416..5613
DNA (198bp) protein (66aa)
50S ribosomal protein L29 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL80_9BURK
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5610..5897
DNA (288bp) protein (96aa)
30S ribosomal protein S17 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKZ6_RUBGI
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1011_13
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6025..6540
DNA (516bp) protein (172aa)
peroxiredoxin Tax=Caldimonas manganoxidans RepID=UPI000367B635
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACB36243.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_1011_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6745..7113
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Thiomonas sp. FB-6 RepID=UPI00037A83C3
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_1011_15
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7142..7459
DNA (318bp) protein (106aa)
50S ribosomal protein L24 Tax=Ideonella sp. B508-1 RepID=UPI00034D17BF
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rplX; 50S ribosomal protein l24
anamox1_curated_scaffold_1011_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7471..8034
DNA (564bp) protein (188aa)
50S ribosomal protein L5 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTV0_9BURK
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rplE; 50S ribosomal protein L5
anamox1_curated_scaffold_1011_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8043..8348
DNA (306bp) protein (102aa)
30S ribosomal protein S14 Tax=Rubrivivax RepID=I0HL01_RUBGI
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8377..8772
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL02_RUBGI
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8795..9328
DNA (534bp) protein (178aa)
50S ribosomal protein L6 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTV3_9BURK
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rplF; 50S ribosomal protein L6
anamox1_curated_scaffold_1011_20
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9340..9705
DNA (366bp) protein (122aa)
50S ribosomal protein L18 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL18_LEPCP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rplR; 50S ribosomal protein L18
anamox1_curated_scaffold_1011_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9734..10252
DNA (519bp) protein (173aa)
30S ribosomal protein S5 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL05_RUBGI
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10286..10468
DNA (183bp) protein (61aa)
50S ribosomal protein L30 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL91_9BURK
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpmD; 50S ribosomal protein L30
anamox1_curated_scaffold_1011_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10468..10899
DNA (432bp) protein (144aa)
50S ribosomal protein L15 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTV7_9BURK
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rplO; 50S ribosomal protein L15
anamox1_curated_scaffold_1011_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10925..12235
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL93_9BURK
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secY; preprotein translocase subunit SecY
anamox1_curated_scaffold_1011_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12237..12455
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL94_9BURK
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
infA; translation initiation factor IF-1
anamox1_curated_scaffold_1011_26
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12483..12596
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Advenella kashmirensis W13003 RepID=V8QY02_9BURK
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
rpmJ; 50S ribosomal protein L36
anamox1_curated_scaffold_1011_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12633..12998
DNA (366bp) protein (122aa)
30S ribosomal protein S13 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LL96_9BURK
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpsM; 30S ribosomal protein S13
anamox1_curated_scaffold_1011_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13034..13438
DNA (405bp) protein (135aa)
30S ribosomal protein S11 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTW2_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
30S ribosomal protein S11
anamox1_curated_scaffold_1011_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13676..14299
DNA (624bp) protein (208aa)
30S ribosomal protein S4 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL13_RUBGI
rpsD; 30S ribosomal protein S4 RpsD
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1011_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14452..15438
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha RpoA (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA-directed RNA polymerase subunit alpha Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL14_RUBGI
Displaying items 1-30 of 43 in total

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