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anamox1_curated_scaffold_421

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_421_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(557..2341)
DNA (1785bp) protein (595aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU63_9BURK
anamox1_curated_scaffold_421_2
uncultured beta proteobacterium CBNPD1 BAC clone 578, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2389..2658)
DNA (270bp) protein (90aa)
ptsH; sugar transport PTS system phosphocarrier protein HPr, PtsH (EC:2.7.11.-)
phosphocarrier protein HPr Tax=Caldimonas manganoxidans RepID=UPI00036C154E
Putative phosphocarrier protein {ECO:0000313|EMBL:ABM53550.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium CBNPD1 BAC clone 578.;"
anamox1_curated_scaffold_421_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2655..3077)
DNA (423bp) protein (141aa)
phosphotransferase system, fructose-specific component IIA (EC:2.7.1.69)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003645D6D
PTS system fructose subfamily transporter subunit IIA {ECO:0000313|EMBL:EGJ11883.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_421_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3074..4273)
DNA (1200bp) protein (400aa)
Arabinose efflux permease family protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU32_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EHR69354.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
major facilitator superfamily transporter
anamox1_curated_scaffold_421_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..4905)
DNA (522bp) protein (174aa)
Putative transmembrane protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCJ5_METPP
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EWS61277.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
anamox1_curated_scaffold_421_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5071..6228
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00036B8E8A
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69352.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_421_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6338..7717
DNA (1380bp) protein (460aa)
mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:BAL97552.1}; EC=6.3.2.- {ECO:0000313|EMBL:BAL97552.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX15_RUBGI
anamox1_curated_scaffold_421_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7714..8325
DNA (612bp) protein (204aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y8G6_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB36232.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_421_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8322..9071
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y8G7_LEPCP
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB36233.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_421_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..11190
DNA (2079bp) protein (693aa)
ribonuclease II (RNB)-like protein (EC:3.1.13.1)
Ribonuclease II Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW0_9BURK
Ribonuclease II {ECO:0000313|EMBL:EGJ11078.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_421_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11194..12078
DNA (885bp) protein (295aa)
TonB family protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKP2_9BURK
TonB family protein {ECO:0000313|EMBL:EHR73046.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TonB family protein
anamox1_curated_scaffold_421_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12075..12932
DNA (858bp) protein (286aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW2_9BURK
anamox1_curated_scaffold_421_13
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12929..13687
DNA (759bp) protein (253aa)
peptidoglycan biosynthesis-like protein (EC:2.4.2.-)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003781277
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_421_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13724..14326
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11082.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_421_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14323..14841
DNA (519bp) protein (173aa)
Thioredoxin-like protein Tax=Variovorax paradoxus B4 RepID=T1X740_VARPD
thioredoxin-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_421_16
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14948..15442
DNA (495bp) protein (165aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase Tax=Caldimonas manganoxidans RepID=UPI0003616B21
anamox1_curated_scaffold_421_17
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15511..15990
DNA (480bp) protein (160aa)
Biotin carboxyl carrier protein of acetyl-CoA carboxylase {ECO:0000313|EMBL:CBA27188.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CBA27188.1};; EC=6.4.1.2 {ECO:0000313|EMBL:CBA27188.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
Biotin carboxyl carrier protein of acetyl-CoA carboxylase Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7K2_9BURK
biotin carboxyl carrier protein
anamox1_curated_scaffold_421_18
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16000..17349
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase, biotin carboxylase AccC (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase AccC {ECO:0000313|EMBL:BAL97562.1}; EC=6.3.4.14 {ECO:0000313|EMBL:BAL97562.1};; EC=6.4.1.2 {ECO:0000313|EMBL:BAL97562.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acetyl-CoA carboxylase, biotin carboxylase AccC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX25_RUBGI
anamox1_curated_scaffold_421_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17432..18358
DNA (927bp) protein (309aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN1_9BURK
anamox1_curated_scaffold_421_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18391..19458
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003723B8D
hypothetical protein
MJ0042 family finger-like protein {ECO:0000313|EMBL:BAL97564.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19497..20402
DNA (906bp) protein (302aa)
adenosine kinase (EC:2.7.1.20)
Adenosine kinase {ECO:0000313|EMBL:BAL97565.1}; EC=2.7.1.20 {ECO:0000313|EMBL:BAL97565.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
sugar kinase Tax=Ideonella sp. B508-1 RepID=UPI0003461E8E
anamox1_curated_scaffold_421_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20431..20724)
DNA (294bp) protein (98aa)
UPF0235 protein RGE_44710 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXS0_RUBGI
hypothetical protein
UPF0235 protein RGE_44710 {ECO:0000256|HAMAP-Rule:MF_00634}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_23
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20891..21289)
DNA (399bp) protein (133aa)
Histone H1-like nucleoprotein HC2 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKU5_9BURK
Histone H1-like nucleoprotein HC2 {ECO:0000313|EMBL:EHR73099.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
histone H1-like protein
anamox1_curated_scaffold_421_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21812..22432)
DNA (621bp) protein (207aa)
ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD (EC:3.5.1.28)
N-acetyl-anhydromuranmyl-L-alanine amidase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRM5_9BURK
N-acetyl-anhydromuranmyl-L-alanine amidase {ECO:0000313|EMBL:EGJ10993.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_421_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22432..23973)
DNA (1542bp) protein (514aa)
Two-component system response regulator PilR Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX33_RUBGI
pilR; two-component system response regulator PilR
Two-component system response regulator PilR {ECO:0000313|EMBL:BAL97570.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23970..25949)
DNA (1980bp) protein (660aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilS; two-component system sensor kinase PilS (EC:2.7.13.3)
Signal transduction histidine kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRM3_9BURK
anamox1_curated_scaffold_421_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25970..26209)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX35_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97572.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26254..27111)
DNA (858bp) protein (286aa)
Putative cytochrome c assembly protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX36_RUBGI
putative cytochrome c assembly protein
Putative cytochrome c assembly protein {ECO:0000313|EMBL:BAL97573.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27157..28536
DNA (1380bp) protein (460aa)
Signal recognition particle protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX37_RUBGI
ffh; signal recognition particle subunit FFH/SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_421_30
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28741..29448
DNA (708bp) protein (236aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WME3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73108.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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