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anamox1_curated_scaffold_169

Search features with annotation key words

Displaying items 61-90 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_169_61
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63802..64794)
DNA (993bp) protein (331aa)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000313|EMBL:EWS59302.1}; EC=1.1.1.79 {ECO:0000313|EMBL:EWS59302.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
2-hydroxyacid dehydrogenase (EC:1.1.1.215)
Putative 2-hydroxyacid dehydrogenase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFY4_METPP
anamox1_curated_scaffold_169_62
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64819..66294)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1F8_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34257.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_169_63
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66325..67272)
DNA (948bp) protein (316aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95693.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_64
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67455..68009
DNA (555bp) protein (185aa)
granule protein PhaP Tax=Caldimonas manganoxidans RepID=UPI0003656F6A
Phasin family protein {ECO:0000313|EMBL:EHR71053.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phaP; granule-associated protein
anamox1_curated_scaffold_169_65
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(68231..68971)
DNA (741bp) protein (247aa)
ABC transporter substrate-binding protein Tax=Serratia plymuthica RepID=S4YPA7_SERPL
ABC transporter substrate-binding protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
anamox1_curated_scaffold_169_66
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68973..70145)
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1T3_RAMTT
hypothetical protein
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
anamox1_curated_scaffold_169_67
unknown

Not on your lists

comp(70157..70276)
DNA (120bp) protein (40aa)

This feature has no annotations

anamox1_curated_scaffold_169_68
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70305..72920)
DNA (2616bp) protein (872aa)
acnD; 2-methylisocitrate dehydratase, Fe/S-dependent (EC:4.2.1.99)
2-methylisocitrate dehydratase, Fe/S-dependent Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HH82_ACHXA
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
anamox1_curated_scaffold_169_69
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73030..73284
DNA (255bp) protein (85aa)
Uncharacterized protein UPF0065 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WRF4_VEREI
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM60211.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
anamox1_curated_scaffold_169_70
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73299..74327
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Cupriavidus sp. BIS7 RepID=UPI00037A2A4F
GntR family transcriptional regulator {ECO:0000313|EMBL:KDP85453.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
GntR family transcriptional regulator
anamox1_curated_scaffold_169_71
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74429..75427
DNA (999bp) protein (333aa)
Uncharacterized protein Tax=Nitratireductor aquibiodomus RA22 RepID=I5C8S8_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_169_72
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75465..75896
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Nitratireductor aquibiodomus RA22 RepID=I5C8S9_9RHIZ
tricarboxylic transport membrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_169_73
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75926..77470
DNA (1545bp) protein (515aa)
Tripartite Tricarboxylate transporter (TTT) family, large transmembrane protein Tax=Nitratireductor pacificus pht-3B RepID=K2MBU2_9RHIZ
protein of unknown function DUF112 transmembrane
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_169_74
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77782..79509
DNA (1728bp) protein (576aa)
cysI; sulfite reductase (NADPH) hemoprotein beta-component CysI (EC:1.8.1.2)
Putative nitrite/sulfite reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUU1_9BURK
Putative nitrite/sulfite reductase {ECO:0000313|EMBL:EGJ12109.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_169_75
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79551..80732
DNA (1182bp) protein (394aa)
cysH; phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase CysH {ECO:0000313|EMBL:BAL95685.1}; EC=1.8.4.8 {ECO:0000313|EMBL:BAL95685.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphoadenosine phosphosulfate reductase CysH Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRP8_RUBGI
anamox1_curated_scaffold_169_76
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80744..81514
DNA (771bp) protein (257aa)
cobA; uroporphyrin-III C-methyltransferase CobA (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLQ3_9BURK
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EHR71045.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_169_77
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81642..81965
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding FdxA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRP6_RUBGI
fdxA; 4Fe-4S ferredoxin, iron-sulfur binding FdxA
4Fe-4S ferredoxin, iron-sulfur binding FdxA {ECO:0000313|EMBL:BAL95683.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_78
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81978..83093
DNA (1116bp) protein (372aa)
thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase {ECO:0000255|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000255|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000255|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000255|HAMAP-Rule:MF_01685};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Ferredoxin--NADP reductase Tax=Methylibium petroleiphilum (strain PM1) RepID=FENR_METPP
anamox1_curated_scaffold_169_79
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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83387..85546
DNA (2160bp) protein (720aa)
Outer membrane receptor protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLP9_9BURK
TonB-dependent siderophore receptor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_trna_1
unknown

Not on your lists

85590..85662
DNA (73bp)
transferRNA Asn
anamox1_curated_scaffold_169_80
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85891..86928)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=Leeia oryzae RepID=UPI00036CBC2B
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
anamox1_curated_scaffold_169_81
unknown

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comp(87053..87793)
DNA (741bp) protein (247aa)

This feature has no annotations

anamox1_curated_scaffold_169_82
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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87828..88028
DNA (201bp) protein (67aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_83
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88186..88512
DNA (327bp) protein (109aa)
Endonuclease Tax=Agrobacterium albertimagni AOL15 RepID=K2Q5I1_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_trna_2
unknown

Not on your lists

comp(88458..88547)
DNA (90bp)
transferRNA Ser
anamox1_curated_scaffold_169_84
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88591..89868)
DNA (1278bp) protein (426aa)
lysC; aspartokinase LysC (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Aspartokinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU12_RUBGI
anamox1_curated_scaffold_169_85
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89966..91294)
DNA (1329bp) protein (443aa)
tilS; tRNA(Ile)-lysidine synthase TilS (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA(Ile)-lysidine synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU13_RUBGI
anamox1_curated_scaffold_169_86
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91316..92287)
DNA (972bp) protein (324aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit AccA (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX5_9BURK
anamox1_curated_scaffold_169_87
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92287..92988)
DNA (702bp) protein (234aa)
alkA; DNA-3-methyladenine glycosylase II AlkA (EC:3.2.2.21)
HhH-GPD superfamily base excision DNA repair protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJX0_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_88
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92993..94381)
DNA (1389bp) protein (463aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase Tax=Ideonella sp. B508-1 RepID=UPI000345BFA6
Displaying items 61-90 of 121 in total

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