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anamox1_curated_scaffold_169

Search features with annotation key words

Displaying items 91-120 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_169_89
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94516..95103
DNA (588bp) protein (196aa)
ppiA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) PpiA (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
peptidyl-prolyl cis-trans isomerase Tax=Ideonella sp. B508-1 RepID=UPI00034691B6
anamox1_curated_scaffold_169_90
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95107..95607
DNA (501bp) protein (167aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ppiB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) PpiB (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQX0_9BURK
anamox1_curated_scaffold_169_91
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95648..96436
DNA (789bp) protein (263aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase LpxH (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQW9_9BURK
anamox1_curated_scaffold_169_92
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96444..97220
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQW8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10736.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_169_93
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97238..99547)
DNA (2310bp) protein (770aa)
clpA; ATP-dependent Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit clpA Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV60_9BURK
ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:EGJ10735.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_169_94
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99544..99900)
DNA (357bp) protein (119aa)
ATP-dependent Clp protease adapter protein ClpS Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HU23_RUBGI
clpS; ATP-dependent Clp protease adapter protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_95
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100114..100356
DNA (243bp) protein (81aa)
Cold-shock DNA-binding protein family protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQW5_9BURK
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:EGJ10733.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
csp; cold shock protein
anamox1_curated_scaffold_169_96
unknown

Not on your lists

comp(100440..101237)
DNA (798bp) protein (266aa)

This feature has no annotations

anamox1_curated_scaffold_169_97
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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101627..104362
DNA (2736bp) protein (912aa)
TPR repeat protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL26_RUBGI
TPR repeat protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_98
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104621..105517)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRZ3_9BURK
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
xerD; tyrosine recombinase XerD
anamox1_curated_scaffold_169_99
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105603..106514
DNA (912bp) protein (304aa)
transporter Tax=Ideonella sp. B508-1 RepID=UPI0003B67FB5
Auxin efflux carrier {ECO:0000313|EMBL:EGJ11108.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_169_100
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106501..107490)
DNA (990bp) protein (330aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Epoxyqueuosine reductase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP85_RUBGI
putative 4Fe-4S cluster-binding ferredoxin protein
anamox1_curated_scaffold_169_101
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107587..108114
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRY8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11106.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ATPase
anamox1_curated_scaffold_169_102
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108111..109457
DNA (1347bp) protein (449aa)
amiC; N-acetylmuramoyl-L-alanine amidase AmiC (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase AmiC {ECO:0000313|EMBL:BAL94820.1}; EC=3.5.1.28 {ECO:0000313|EMBL:BAL94820.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
N-acetylmuramoyl-L-alanine amidase AmiC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP83_RUBGI
anamox1_curated_scaffold_169_103
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109481..110200)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUD3_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ11233.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_169_104
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110197..110874)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSB6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_105
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110894..111313)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSB7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11235.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_169_106
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111356..113536)
DNA (2181bp) protein (727aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABB06230.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABB06230.1};; EC=4.2.1.17 {ECO:0000313|EMBL:ABB06230.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase Tax=Burkholderia sp. (strain 383) RepID=Q39MT6_BURS3
anamox1_curated_scaffold_169_107
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113539..114744)
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] bin=BDI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_108
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114890..115396
DNA (507bp) protein (169aa)
Thioesterase superfamily protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZX6_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_109
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115406..116056)
DNA (651bp) protein (217aa)
chemotaxis protein Z Tax=Ideonella sp. B508-1 RepID=UPI00034655B9
chemotaxis phosphatase, CheZ
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_169_110
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116079..116477)
DNA (399bp) protein (133aa)
chemotaxis protein CheY Tax=Ideonella sp. B508-1 RepID=UPI000349A8BD
cheY; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:BAL95049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_111
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116569..117549)
DNA (981bp) protein (327aa)
Outer membrane chemotaxis MotB protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPW1_RUBGI
motB; outer membrane chemotaxis MotB protein
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:EGJ11552.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_169_112
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117562..118419)
DNA (858bp) protein (286aa)
Flagellar motor protein MotA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPW0_RUBGI
motA; flagellar motor protein MotA
Flagellar motor protein MotA {ECO:0000313|EMBL:BAL95047.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_113
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118430..119311)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00037E4793
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAD22707.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
type 12 methyltransferase
anamox1_curated_scaffold_169_114
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119543..120118)
DNA (576bp) protein (192aa)
Flagellar transcriptional regulator FlhC Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y372_LEPCP
transcriptional activator FlhC
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_169_115
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120186..120509)
DNA (324bp) protein (108aa)
Flagellar transcriptional regulator FlhD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPV7_RUBGI
flhD; flagellar transcriptional activator FlhD
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_116
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120962..122104)
DNA (1143bp) protein (381aa)
ABC transporter substrate-binding protein Tax=Ideonella sp. B508-1 RepID=UPI00034615CE
livK; putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK
Putative high-affinity branched-chain amino acid ABC transporter substrate binding protein LivK {ECO:0000313|EMBL:BAL96251.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_169_117
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122271..122639)
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7A3_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_169_118
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122632..123075)
DNA (444bp) protein (148aa)
holC; putative DNA polymerase III chi subunit HolC (EC:2.7.7.7)
Putative DNA polymerase III chi subunit HolC {ECO:0000313|EMBL:BAL96252.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAL96252.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative DNA polymerase III chi subunit HolC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTB5_RUBGI
Displaying items 91-120 of 121 in total

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