ggKbase home page

anamox1_curated_scaffold_2774

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2774_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..368)
DNA (366bp) protein (122aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ACV34196.1}; EC=1.1.1.132 {ECO:0000313|EMBL:ACV34196.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Nucleotide sugar dehydrogenase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNR0_ACCPU
anamox1_curated_scaffold_2774_2
unknown

Not on your lists

528..698
DNA (171bp) protein (57aa)

This feature has no annotations

anamox1_curated_scaffold_2774_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1407..2441
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Janthinobacterium lividum RepID=UPI00028923F4
Uncharacterized protein {ECO:0000313|EMBL:KIO49446.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
anamox1_curated_scaffold_2774_4
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2471..3574
DNA (1104bp) protein (368aa)
Oxidoreductase Tax=Mycobacterium avium RepID=V7JXX9_MYCPC
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:ETZ52917.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium MAV_120709_2344.;"
putative oxidoreductase
anamox1_curated_scaffold_2774_5
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3615..4496
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Mycobacterium yongonense 05-1390 RepID=S4Z786_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EWS55443.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
hypothetical protein
anamox1_curated_scaffold_2774_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4750..5826
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DKA4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63906.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
anamox1_curated_scaffold_2774_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5942..6832)
DNA (891bp) protein (297aa)
hypothetical protein bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox1_curated_scaffold_2774_8
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7020..7937
DNA (918bp) protein (306aa)
Transposase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTD9_9BURK
Transposase {ECO:0000313|EMBL:KFB73426.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
toxin RelE
anamox1_curated_scaffold_2774_9
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7946..9355
DNA (1410bp) protein (470aa)
Ribonuclease {ECO:0000313|EMBL:EXI64362.1}; EC=3.1.-.- {ECO:0000313|EMBL:EXI64362.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
RNA-metabolising metallo-beta-lactamase Tax=Thiocapsa marina 5811 RepID=F9UDK1_9GAMM
beta-lactamase
anamox1_curated_scaffold_2774_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..9769)
DNA (411bp) protein (137aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI000349D14A
Glutaredoxin-like protein {ECO:0000313|EMBL:EHR70842.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glutaredoxin
anamox1_curated_scaffold_2774_11
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9905..11998
DNA (2094bp) protein (698aa)
Peptidase C14 caspase catalytic subunit p20 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSX6_ACCPU
peptidase C14 caspase catalytic subunit p20
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
anamox1_curated_scaffold_2774_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12066..12632)
DNA (567bp) protein (189aa)
rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC (EC:5.1.3.13)
dTDP-4,deoxyrhamnose 3,5 epimerase Tax=Rubrivivax gelatinosus S1 RepID=L8BA46_RUBGE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_2774_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12629..13513)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Glucose-1-phosphate thymidylyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNR8_9BURK
glucose-1-phosphate thymidylyltransferase
anamox1_curated_scaffold_2774_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13590..14489)
DNA (900bp) protein (300aa)
rmlD; dTDP-4-dehydrorhamnose reductase RmlD (EC:1.1.1.133)
TDP-rhamnose synthetase, NAD(P)-binding Tax=Rubrivivax gelatinosus S1 RepID=L8BAP5_RUBGE
TDP-rhamnose synthetase, NAD(P)-binding {ECO:0000313|EMBL:CCF78655.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
anamox1_curated_scaffold_2774_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14494..15561)
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dTDP-glucose 4,6-dehydratase Tax=Ideonella sp. B508-1 RepID=UPI000345EB06
rmlB; dTDP-D-glucose 4,6-dehydratase
anamox1_curated_scaffold_2774_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15569..17038)
DNA (1470bp) protein (490aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAL94427.1}; EC=2.7.7.22 {ECO:0000313|EMBL:BAL94427.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Mannose-1-phosphate guanylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN40_RUBGI
anamox1_curated_scaffold_2774_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17069..18085)
DNA (1017bp) protein (339aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP03_9BURK
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGJ10071.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_2774_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18094..19380)
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN42_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_2774_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19380..20723)
DNA (1344bp) protein (448aa)
Glycosyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN43_RUBGI
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAL94430.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2774_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20925..21518
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN44_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94431.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2774_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21518..23074
DNA (1557bp) protein (519aa)
ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN45_RUBGI
anamox1_curated_scaffold_2774_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23153..24607
DNA (1455bp) protein (485aa)
Na+/proline symporter Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJF3_9BURK
Na+/proline symporter {ECO:0000313|EMBL:EHR70174.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putP; Na+/proline symporter
anamox1_curated_scaffold_2774_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24665..25012
DNA (348bp) protein (116aa)
FmdB family regulatory protein Tax=Hydrogenophaga sp. PBC RepID=I4MRW6_9BURK
FmdB family regulatory protein {ECO:0000313|EMBL:EIK91956.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
FmdB family regulatory protein
anamox1_curated_scaffold_2774_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25038..25691
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP07_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10075.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_2774_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25772..27562
DNA (1791bp) protein (597aa)
aspS; aspartyl-tRNA synthetase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase AspS {ECO:0000313|EMBL:BAL94435.1}; EC=6.1.1.12 {ECO:0000313|EMBL:BAL94435.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Aspartate--tRNA ligase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN48_RUBGI
anamox1_curated_scaffold_2774_26
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27744..29168)
DNA (1425bp) protein (475aa)
Transposase, IS4 family protein Tax=Pseudomonas RepID=I7J0S0_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:EXI88552.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transposase, IS4 family protein
anamox1_curated_scaffold_2774_27

Not on your lists

comp(29337..29540)
DNA (204bp) protein (68aa)
Putative integron gene cassette protein Tax=uncultured bacterium RepID=B7VDY8_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02842.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
anamox1_curated_scaffold_2774_28
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29710..30036)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Burkholderia xenovorans (strain LB400) RepID=Q13FS8_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37061.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
anamox1_curated_scaffold_2774_29
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30033..30146)
DNA (114bp) protein (38aa)
Putative uncharacterized protein Tax=Burkholderia xenovorans (strain LB400) RepID=Q13FS8_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37061.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
anamox1_curated_scaffold_2774_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30508..31473
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PBJ6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36980.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy