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anamox1_curated_scaffold_211

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Displaying items 91-120 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_211_86
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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101652..102845
DNA (1194bp) protein (398aa)
ATP phosphoribosyltransferase regulatory subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU8_RUBGI
hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_87
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102875..104212
DNA (1338bp) protein (446aa)
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Adenylosuccinate synthetase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU7_RUBGI
anamox1_curated_scaffold_211_88
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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104274..104795
DNA (522bp) protein (174aa)
Putative transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV67_9BURK
Putative transferase {ECO:0000313|EMBL:EGJ12235.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_211_trna_6
unknown

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comp(104908..104989)
DNA (82bp)
transferRNA Leu
anamox1_curated_scaffold_211_89
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105070..107241
DNA (2172bp) protein (724aa)
rnr; ribonuclease R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribonuclease R Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU5_RUBGI
anamox1_curated_scaffold_211_90
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(107304..108872)
DNA (1569bp) protein (523aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV69_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12237.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_211_91
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


109099..109845
DNA (747bp) protein (249aa)
30S ribosomal protein S2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSU1_RUBGI
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_92
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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110008..110904
DNA (897bp) protein (299aa)
endo-1,4-D-glucanase Tax=Caldimonas manganoxidans RepID=UPI0003707910
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
tsf; elongation factor Ts
anamox1_curated_scaffold_211_93
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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110977..111687
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
uridylate kinase Tax=Ideonella sp. B508-1 RepID=UPI0003494B08
anamox1_curated_scaffold_211_94
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111727..112293
DNA (567bp) protein (189aa)
Ribosome-recycling factor Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRD4_9BURK
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rrf; ribosome recycling factor Rrf
anamox1_curated_scaffold_211_95
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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112306..113046
DNA (741bp) protein (247aa)
uppS; undecaprenyl pyrophosphate synthetase UppS (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Isoprenyl transferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HST7_RUBGI
anamox1_curated_scaffold_211_96
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113052..113897
DNA (846bp) protein (282aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphatidate cytidylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HST6_RUBGI
anamox1_curated_scaffold_211_97
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113911..115098
DNA (1188bp) protein (396aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH92_METPP
anamox1_curated_scaffold_211_98
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115099..115686
DNA (588bp) protein (196aa)
ecfE; regulator of sigma E protease RseP (EC:3.4.24.-)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003743C3D
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_99
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115652..116470
DNA (819bp) protein (273aa)
RIP metalloprotease RseP Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRD0_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_100
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116478..118781
DNA (2304bp) protein (768aa)
Outer membrane protein assembly factor BamA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HST3_RUBGI
yaeT; outer membrane protein assembly factor YaeT
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_101
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118781..119302
DNA (522bp) protein (174aa)
Putative transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV81_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EGJ12249.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ompH; outer membrane chaperone Skp
anamox1_curated_scaffold_211_102
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119337..120359
DNA (1023bp) protein (341aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRC7_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_103
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120356..120805
DNA (450bp) protein (150aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRC6_9BURK
anamox1_curated_scaffold_211_104
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120840..121628
DNA (789bp) protein (263aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000255|HAMAP-Rule:MF_00387}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000255|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000255|HAMAP-Rule:MF_00387};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=LPXA_LEPCP
anamox1_curated_scaffold_211_105
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121637..122767
DNA (1131bp) protein (377aa)
lpxB; lipid-A-disaccharide synthase LpxB (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Lipid-A-disaccharide synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS8_RUBGI
anamox1_curated_scaffold_211_106
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122739..123365
DNA (627bp) protein (209aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII 2 {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII 2 {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
ribonuclease HII Tax=Caldimonas manganoxidans RepID=UPI0003627D4D
anamox1_curated_scaffold_211_107
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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123355..124167
DNA (813bp) protein (271aa)
tRNA/rRNA methyltransferase protein (EC:2.1.1.-)
tRNA/rRNA methyltransferase protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS6_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_108
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124161..124985)
DNA (825bp) protein (275aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Putative phosphoenolpyruvate synthase regulatory protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV88_9BURK
putative phosphotransferase
anamox1_curated_scaffold_211_109
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125200..127611
DNA (2412bp) protein (804aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRC0_9BURK
anamox1_curated_scaffold_211_110
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


127708..128070
DNA (363bp) protein (121aa)
30S ribosomal protein S6 Tax=Ideonella sp. B508-1 RepID=UPI00034D62DF
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_111
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128117..128407
DNA (291bp) protein (97aa)
Primosomal replication protein N Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV92_9BURK
Primosomal replication protein n {ECO:0000256|SAAS:SAAS00194886}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
priB; primosomal replication protein N PriB
anamox1_curated_scaffold_211_112
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


128454..128744
DNA (291bp) protein (97aa)
30S ribosomal protein S18 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSS0_RUBGI
rpsR; 30S ribosomal protein S18 RpsR
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_113
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


128758..129210
DNA (453bp) protein (151aa)
50S ribosomal protein L9 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV93_9BURK
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rplI; 50S ribosomal protein L9
anamox1_curated_scaffold_211_114
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129412..130824
DNA (1413bp) protein (471aa)
dnaB; replicative DNA helicase DnaB (EC:3.6.4.12)
Replicative DNA helicase DnaB {ECO:0000313|EMBL:BAL96055.1}; EC=3.6.4.12 {ECO:0000313|EMBL:BAL96055.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Replicative DNA helicase DnaB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSR8_RUBGI
Displaying items 91-120 of 134 in total

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