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anamox1_curated_scaffold_211

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_211_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..535)
DNA (534bp) protein (178aa)
TRAP dicarboxylate transporter DctM subunit Tax=Bradyrhizobiaceae RepID=F7QJ95_9BRAD
tripartite ATP-independent periplasmic transporter DctQ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_211_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(546..1103)
DNA (558bp) protein (186aa)
TRAP dicarboxylate transporter DctQ subunit Tax=Bradyrhizobiaceae RepID=F7QJ96_9BRAD
dctQ4; TRAP dicarboxylate transporter subunit DctQ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_211_3
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1093..2103)
DNA (1011bp) protein (337aa)
Neu5Ac-binding protein Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YFU4_9PROT
ABC transporter substrate-binding protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_211_4
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2212..3963)
DNA (1752bp) protein (584aa)
Thiamine pyrophosphate TPP-binding domain-containing protein Tax=Leptonema illini DSM 21528 RepID=H2CBI0_9LEPT
thiamine pyrophosphate TPP-binding domain-containing protein
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:BAO29875.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
anamox1_curated_scaffold_211_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4078..6477
DNA (2400bp) protein (800aa)
Putative transcription accessory protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ01_9BURK
Putative transcription accessory protein {ECO:0000313|EMBL:EGJ10419.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
RNA-binding S1 domain-containing protein
anamox1_curated_scaffold_211_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6673..8583
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
thrS; threonyl-tRNA synthetase ThrS (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKC8_9BURK
anamox1_curated_scaffold_211_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8668..9207
DNA (540bp) protein (180aa)
Translation initiation factor IF-3 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS07_RUBGI
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9332..9535
DNA (204bp) protein (68aa)
50S ribosomal protein L35 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPZ2_9BURK
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpmI; 50S ribosomal protein L35 RpmI
anamox1_curated_scaffold_211_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9566..9922
DNA (357bp) protein (119aa)
50S ribosomal protein L20 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS09_RUBGI
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10008..11051
DNA (1044bp) protein (348aa)
pheS; phenylalanyl-tRNA synthetase alpha chain PheS (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phenylalanine--tRNA ligase alpha subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS10_RUBGI
anamox1_curated_scaffold_211_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11077..13500
DNA (2424bp) protein (808aa)
pheT; phenylalanyl-tRNA synthetase beta chain PheT (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phenylalanine--tRNA ligase beta subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS11_RUBGI
anamox1_curated_scaffold_211_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13536..13901
DNA (366bp) protein (122aa)
Integration host factor subunit alpha Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS12_RUBGI
ihfA; integration host factor subunit alpha IhfA
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|SAAS:SAAS00062113}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_211_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13936..14376
DNA (441bp) protein (147aa)
Regulatory protein merr Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPY7_9BURK
Regulatory protein merr {ECO:0000313|EMBL:EGJ10405.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
MerR family transcriptional regulator
anamox1_curated_scaffold_211_trna_1
unknown

Not on your lists

14446..14519
DNA (74bp)
transferRNA Pro
anamox1_curated_scaffold_211_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14713..16005)
DNA (1293bp) protein (431aa)
Peptidase S8/S53 subtilisin kexin sedolisin Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXS3_9BURK
putative peptidase (S8 and S53, subtilisin,kexin, sedolisin family) (fragment)
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
anamox1_curated_scaffold_211_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16298..17323
DNA (1026bp) protein (342aa)
Putative ABC transporter, substrate-binding protein Tax=Variovorax paradoxus B4 RepID=T1X7G6_VARPD
putative ABC transporter, substrate-binding protein
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGU48269.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_211_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17402..19594
DNA (2193bp) protein (731aa)
Putative ABC transporter, permease protein Tax=Variovorax paradoxus B4 RepID=T1X7Y2_VARPD
putative ABC transporter, permease protein
Putative ABC transporter, permease protein {ECO:0000313|EMBL:AGU48270.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_211_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19636..20688
DNA (1053bp) protein (351aa)
sugar ABC transporter substrate-binding protein Tax=Variovorax paradoxus RepID=UPI0003734938
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EJL74138.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter
anamox1_curated_scaffold_211_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20732..21646)
DNA (915bp) protein (305aa)
fumarylacetoacetate hydrolase Tax=Acidovorax radicis RepID=UPI0002375C69
hydratase/decarboxylase
Hydratase/decarboxylase {ECO:0000313|EMBL:AFU45833.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox1_curated_scaffold_211_19
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21979..23613)
DNA (1635bp) protein (545aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G0X4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD65218.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
ilvB; acetolactate synthase I/II/III large subunit
anamox1_curated_scaffold_211_20
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24269..24904)
DNA (636bp) protein (212aa)
Putative transcription regulator protein Tax=Halomonas sp. A3H3 RepID=T2L826_9GAMM
transcriptional regulator, TetR family
Tax=DS1215_Halomonas_54_146
anamox1_curated_scaffold_211_21
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25121..26200
DNA (1080bp) protein (360aa)
Putative HlyD family secretion protein Tax=Cupriavidus sp. HMR-1 RepID=L2EA16_9BURK
HlyD family secretion protein {ECO:0000313|EMBL:KCB44865.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
HlyD family secretion protein
anamox1_curated_scaffold_211_22
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26197..28986
DNA (2790bp) protein (930aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter Tax=Sphingobium lactosutens DS20 RepID=T0HUF9_9SPHN
ABC transporter {ECO:0000313|EMBL:EQB16747.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
anamox1_curated_scaffold_211_23
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28989..30116
DNA (1128bp) protein (376aa)
ABC transporter; K09686 antibiotic transport system permease protein bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter
ABC transporter {ECO:0000313|EMBL:AJD52991.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
anamox1_curated_scaffold_211_24
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30206..32050
DNA (1845bp) protein (615aa)
Poly-beta-hydroxybutyrate polymerase domain protein Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGV0_ACIET
poly-beta-hydroxybutyrate polymerase domain-containing protein
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:ACM32773.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
anamox1_curated_scaffold_211_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32107..32706
DNA (600bp) protein (200aa)
Acetate kinase Tax=Pseudomonas aeruginosa BL17 RepID=U8HEC9_PSEAI
Universal stress protein UspA {ECO:0000313|EMBL:EWC42018.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
UspA domain-containing protein
anamox1_curated_scaffold_211_26
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32770..33975)
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUB9_ACCPU
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:KDB50391.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
L-carnitine dehydratase/bile acid-inducible protein F
anamox1_curated_scaffold_211_27
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33975..35135)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YWC7_9RHOO
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ENO84264.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
acyl-CoA dehydrogenase domain-containing protein
anamox1_curated_scaffold_211_28
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35411..37141
DNA (1731bp) protein (577aa)
Putative AP superfamily protein Tax=Polaromonas sp. CF318 RepID=J2KZJ8_9BURK
type I phosphodiesterase / nucleotide pyrophosphatase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
anamox1_curated_scaffold_211_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37215..39338)
DNA (2124bp) protein (708aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hppA; pyrophosphate-energized proton pump HppA (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVX1_9BURK
Displaying items 1-30 of 134 in total

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