ggKbase home page

anamox1_curated_scaffold_1633

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1633_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..802
DNA (801bp) protein (267aa)
Uncharacterized NAD(FAD)-dependent dehydrogenases Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SL4_NITEU
NAD(FAD)-dependent dehydrogenase
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG88375.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
anamox1_curated_scaffold_1633_2
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(813..1511)
DNA (699bp) protein (233aa)
UPI0003CF1013 related cluster Tax=unknown RepID=UPI0003CF1013
Uncharacterized protein {ECO:0000313|EMBL:KDB05089.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
short-chain dehydrogenase/reductase SDR
anamox1_curated_scaffold_1633_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1556..2092)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00035DA74E
Methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:GAD22238.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methylated-DNA--protein-cysteine methyltransferase
anamox1_curated_scaffold_1633_4
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2257..3231
DNA (975bp) protein (325aa)
TRAP dicarboxylate transporter, DctP subunit Tax=uncultured bacterium RepID=K1Z8V7_9BACT
TRAP dicarboxylate transporter subunit DctP
Tax=RBG_13_Deltaproteobacteria_49_15_curated
anamox1_curated_scaffold_1633_5
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3292..3768
DNA (477bp) protein (159aa)
DctQ, TRAP-type C4-dicarboxylate transport system Tax=uncultured bacterium RepID=K1XUV4_9BACT
tripartite AtP-independent periplasmic transporter subunit DctQ
Tax=RBG_13_Deltaproteobacteria_49_15_curated
anamox1_curated_scaffold_1633_6
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3765..5069
DNA (1305bp) protein (435aa)
TRAP transporter, DctM subunit Tax=Desulfovibrio sp. A2 RepID=G2H9B0_9DELT
TRAP dicarboxylate transporter subunit DctM
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox1_curated_scaffold_1633_7
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5060..5455)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034D8426
Uncharacterized protein {ECO:0000313|EMBL:KIF80526.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
anamox1_curated_scaffold_1633_8
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..7500)
DNA (2049bp) protein (683aa)
TRAP transporter 4TM/12TM fusion protein Tax=Thauera phenylacetica B4P RepID=N6YU12_9RHOO
TRAP transporter 4TM/12TM fusion protein {ECO:0000313|EMBL:ENO95020.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
TRAP transporter 4TM/12TM fusion protein
anamox1_curated_scaffold_1633_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7589..8554)
DNA (966bp) protein (322aa)
C4-dicarboxylate ABC transporter Tax=Herbaspirillum sp. JC206 RepID=UPI000366FFC0
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIF80527.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
TRAP transporter solute receptor TAXI family protein
anamox1_curated_scaffold_1633_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8970..9089
DNA (120bp) protein (40aa)
Phage integrase family protein Tax=Proteobacteria RepID=A1W957_ACISJ
integrase
Integrase {ECO:0000313|EMBL:AIJ45838.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
anamox1_curated_scaffold_1633_11
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9229..9612
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Ralstonia solanacearum SD54 RepID=V5A8Z2_RALSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJN29318.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
anamox1_curated_scaffold_1633_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9596..9898
DNA (303bp) protein (101aa)
DNA-binding protein Tax=Ralstonia solanacearum FQY_4 RepID=M4USN9_RALSL
DNA-binding protein {ECO:0000313|EMBL:KIL05682.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
DNA-binding protein
anamox1_curated_scaffold_1633_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9981..10166)
DNA (186bp) protein (62aa)
Translation repressor RelE Tax=Thauera terpenica 58Eu RepID=S9ZPJ3_9RHOO
Translation repressor RelE {ECO:0000313|EMBL:EPZ15452.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
YafQ toxin protein
anamox1_curated_scaffold_1633_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10273..10575)
DNA (303bp) protein (101aa)
DNA damage-inducible protein Tax=Thauera terpenica 58Eu RepID=S9ZLE3_9RHOO
DNA damage-inducible protein {ECO:0000313|EMBL:EPZ15451.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
relB; damage inducible-like protein, anti-RelE antitoxin
anamox1_curated_scaffold_1633_trna_1
unknown

Not on your lists

comp(10903..10975)
DNA (73bp)
transferRNA Ala
anamox1_curated_scaffold_1633_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11081..11932
DNA (852bp) protein (284aa)
Esterase/lipase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM63_9BURK
Esterase/lipase {ECO:0000313|EMBL:EHR71948.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1633_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11952..12845)
DNA (894bp) protein (298aa)
RarD protein Tax=Acidovorax sp. CF316 RepID=J0UAM6_9BURK
RarD protein {ECO:0000313|EMBL:EJE53242.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RarD protein, DMT superfamily transporter
anamox1_curated_scaffold_1633_17
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12918..14264)
DNA (1347bp) protein (449aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037D5C3A
Peptidase M48 Ste24p {ECO:0000313|EMBL:KDB53303.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
peptidase M48 Ste24p
anamox1_curated_scaffold_1633_18
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14318..14869)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9DT70_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80580.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
isochorismatase domain-containing protein
anamox1_curated_scaffold_1633_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15016..15552
DNA (537bp) protein (179aa)
hydrolase (EC:3.1.1.-)
Alpha/beta hydrolase fold-3 domain protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTD6_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1633_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15597..16385
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUS8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96765.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1633_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16436..17974
DNA (1539bp) protein (513aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR73_9BURK
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:EHR71693.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1633_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17984..18283)
DNA (300bp) protein (100aa)
Alpha/beta hydrolase fold protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN47_9BURK
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EGJ09765.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
alpha/beta hydrolase
Displaying 23 items

View Taxonomy