ggKbase home page

anamox1_curated_scaffold_1359

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1359_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..614)
DNA (612bp) protein (204aa)
UvrABC system protein B Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUF4_THIA3
uvrB; UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B)
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
anamox1_curated_scaffold_1359_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

786..1997
DNA (1212bp) protein (404aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAL94879.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAL94879.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Aminotransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE2_RUBGI
anamox1_curated_scaffold_1359_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2188..3474
DNA (1287bp) protein (429aa)
phaZ; putative polyhydroxyalkanoate depolymerase PhaZ (EC:3.1.1.-)
Putative polyhydroxyalkanoate depolymerase PhaZ {ECO:0000313|EMBL:BAL94878.1}; EC=3.1.1.- {ECO:0000313|EMBL:BAL94878.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative polyhydroxyalkanoate depolymerase PhaZ Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE1_RUBGI
anamox1_curated_scaffold_1359_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3471..4139
DNA (669bp) protein (223aa)
RnfABCDGE type electron transport complex subunit B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS43_9BURK
rnfB; electron transport complex, RnfABCDGE type, B subunit RnfB
RnfABCDGE type electron transport complex subunit B {ECO:0000313|EMBL:EGJ11161.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1359_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4136..4813
DNA (678bp) protein (226aa)
nth; endonuclease III Nth (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Endonuclease III Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD9_RUBGI
anamox1_curated_scaffold_1359_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4810..5022
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKI8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72455.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1359_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5019..5342
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y863_LEPCP
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_1359_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5747..6562
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS38_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11156.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1359_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6563..7564)
DNA (1002bp) protein (334aa)
Diguanylate cyclase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD4_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL94871.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1359_10
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7706..7918
DNA (213bp) protein (71aa)
30S ribosomal protein S21 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKL7_9BURK
rpsU; 30S ribosomal protein S21
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_1359_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8004..8450
DNA (447bp) protein (149aa)
GatB/YqeY domain-containing protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS34_9BURK
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:EGJ11152.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1359_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..8817
DNA (363bp) protein (121aa)
Putative hydrolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD0_RUBGI
putative hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1359_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8865..10238)
DNA (1374bp) protein (458aa)
peptidase C69 Tax=Caldimonas manganoxidans RepID=UPI000365D37B
tldE; protein TldE
Protein TldE {ECO:0000313|EMBL:BAL94863.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1359_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10334..10882
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11146.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1359_15
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10902..11507
DNA (606bp) protein (202aa)
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:EWS60794.1}; EC=2.7.7.75 {ECO:0000313|EMBL:EWS60794.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Molybdopterin adenylyltransferase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJQ3_METPP
molybdopterin adenylyltransferase
anamox1_curated_scaffold_1359_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11517..12296)
DNA (780bp) protein (260aa)
cysE; serine O-acetyltransferase CysE (EC:2.3.1.30)
Serine O-acetyltransferase CysE {ECO:0000313|EMBL:BAL94860.1}; EC=2.3.1.30 {ECO:0000313|EMBL:BAL94860.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
serine O-acetyltransferase Tax=Ideonella sp. B508-1 RepID=UPI00034DB3BF
anamox1_curated_scaffold_1359_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12350..13150)
DNA (801bp) protein (267aa)
trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC:2.1.1.-)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA (Cytidine/uridine-2'-O-)-methyltransferase TrmJ Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPC2_RUBGI
anamox1_curated_scaffold_1359_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13277..14116
DNA (840bp) protein (280aa)
suhB; myo-inositol-1(or 4)-monophosphatase SuhB (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS24_9BURK
Inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:EGJ11142.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1359_19
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14136..15491
DNA (1356bp) protein (452aa)
amidase (EC:3.5.1.4)
Putative amidase Tax=Bordetella bronchiseptica 1289 RepID=K4TS50_BORBO
Amidase {ECO:0000313|EMBL:KCB45911.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
anamox1_curated_scaffold_1359_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15543..16067)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTB7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11585.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1359_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16202..17674
DNA (1473bp) protein (491aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
guaB; inosine-5'-monophosphate dehydrogenase GuaB (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTB6_9BURK
anamox1_curated_scaffold_1359_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17671..18924
DNA (1254bp) protein (418aa)
Arabinose efflux permease family protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIL3_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EHR72380.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
tetracycline-efflux transporter
anamox1_curated_scaffold_1359_23
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18933..20519
DNA (1587bp) protein (529aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
GMP synthase (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) (Glutamine amidotransferase) (GMP synthetase) (GMPS) Tax=mine drainage metagenome RepID=E6PRZ8_9ZZZZ
anamox1_curated_scaffold_1359_24
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20474..21727)
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Rhodanobacter denitrificans RepID=I4WE47_9GAMM
ABC-type transport system, involved in lipoprotein release, permease component
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying 24 items

View Taxonomy