ggKbase home page

anamox1_curated_scaffold_2248

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2248_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

anamox1_curated_scaffold_2248_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..3665)
DNA (3522bp) protein (1174aa)
Chromosome partition protein Smc Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPS0_9BURK
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
smc; chromosome partition protein SMC
anamox1_curated_scaffold_2248_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4261..4701
DNA (441bp) protein (147aa)
Nuclear protein SET Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPR8_9BURK
Nuclear protein SET {ECO:0000313|EMBL:EGJ10336.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
SET domain-containing protein
anamox1_curated_scaffold_2248_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4739..5941
DNA (1203bp) protein (401aa)
succinyldiaminopimelate transaminase (EC:2.6.1.11)
Succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:ABM94766.1}; EC=2.6.1.11 {ECO:0000313|EMBL:ABM94766.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Succinyldiaminopimelate aminotransferase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGS7_METPP
anamox1_curated_scaffold_2248_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5938..6771
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI04_9BURK
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
anamox1_curated_scaffold_2248_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6802..7989
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPR4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10332.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
twitching motility protein PilU PilT like
anamox1_curated_scaffold_2248_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7986..9131
DNA (1146bp) protein (382aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690}; Short=SDAP desuccinylase {ECO:0000255|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000255|HAMAP-Rule:MF_01690};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000255|HAMAP-Rule:MF_01690}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Succinyl-diaminopimelate desuccinylase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=DAPE_LEPCP
succinyl-diaminopimelate desuccinylase
anamox1_curated_scaffold_2248_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9128..9988
DNA (861bp) protein (287aa)
Putative methyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRV6_RUBGI
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL95743.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2248_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9985..11988
DNA (2004bp) protein (668aa)
Putative ATP-binding ABC transporter protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPR1_9BURK
Putative ATP-binding ABC transporter protein {ECO:0000313|EMBL:EGJ10329.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter ATP-binding protein
anamox1_curated_scaffold_2248_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..12363
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPR0_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94997.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_2248_11
unknown

Not on your lists

12421..12558
DNA (138bp) protein (46aa)

This feature has no annotations

anamox1_curated_scaffold_2248_12
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12607..13143)
DNA (537bp) protein (179aa)
Branched-chain amino acid ABC transporter ATP-binding protein Tax=Thauera sp. 63 RepID=N6XZ07_9RHOO
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENO75407.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
branched-chain amino acid ABC transporter ATP-binding protein
anamox1_curated_scaffold_2248_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13378..13890)
DNA (513bp) protein (171aa)
Putative transposase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPA5_9BURK
Putative transposase {ECO:0000313|EMBL:EHR71157.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_2248_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14452..15465)
DNA (1014bp) protein (338aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00035F2CA0
intI; DNA integrase IntI
Tax=RBG_16_Betaproteobacteria_64_18_curated
anamox1_curated_scaffold_2248_15
unknown

Not on your lists

15488..15550
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 15 items

View Taxonomy