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anamox1_curated_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_620_1
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Kineosphaera limosa NBRC 100340 RepID=K6VN41_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB97648.1}; species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
patatin-like protein phospholipase-like protein
anamox1_curated_scaffold_620_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(375..1526)
DNA (1152bp) protein (384aa)
lldA; L-lactate dehydrogenase LldA (EC:1.1.2.3)
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL25_9BURK
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:EHR70214.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_620_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1650..2042
DNA (393bp) protein (131aa)
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI0003B68557
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70217.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_620_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2056..3156)
DNA (1101bp) protein (367aa)
dinP; DNA-directed DNA polymerase DinP (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA polymerase IV Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVF4_RUBGI
anamox1_curated_scaffold_620_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3233..3544
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYI9_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_620_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3564..4967)
DNA (1404bp) protein (468aa)
argH; argininosuccinate lyase ArgH (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Argininosuccinate lyase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVF3_RUBGI
anamox1_curated_scaffold_620_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5049..6170
DNA (1122bp) protein (374aa)
algZ; two-component system sensor protein, alginate biosynthesis (EC:2.7.3.-)
Two-component system sensor protein, alginate biosynthesis {ECO:0000313|EMBL:BAL96989.1}; EC=2.7.3.- {ECO:0000313|EMBL:BAL96989.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Two-component system sensor protein, alginate biosynthesis Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVF2_RUBGI
anamox1_curated_scaffold_620_8
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6167..6919
DNA (753bp) protein (251aa)
LytR/AlgR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDB53737.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
algR; LytTR family two component transcriptional regulator
anamox1_curated_scaffold_620_trna_1
unknown

Not on your lists

comp(7049..7121)
DNA (73bp)
transferRNA Thr
anamox1_curated_scaffold_620_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7179..8195)
DNA (1017bp) protein (339aa)
cbbF; fructose-1,6-bisphosphatase CbbF (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Fructose-1,6-bisphosphatase class 1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQA0_RUBGI
anamox1_curated_scaffold_620_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8192..10891)
DNA (2700bp) protein (900aa)
pepN; aminopeptidase N PepN (EC:3.4.11.2)
Aminopeptidase N Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNA6_9BURK
Aminopeptidase N {ECO:0000313|EMBL:EGJ09824.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_620_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10976..11875)
DNA (900bp) protein (300aa)
Peptide chain release factor 2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQA3_RUBGI
prfB; peptide chain release factor RF-2 PrfB
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_620_12
unknown

Not on your lists

comp(11997..12119)
DNA (123bp) protein (41aa)

This feature has no annotations

anamox1_curated_scaffold_620_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12206..12613)
DNA (408bp) protein (136aa)
Predicted thioesterase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0H0_AROAE
thioesterase
Predicted thioesterase {ECO:0000313|EMBL:CAI09194.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
anamox1_curated_scaffold_620_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12636..14714)
DNA (2079bp) protein (693aa)
Organic acid-CoA ligase (ADP forming) Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0H1_AROAE
organic acid-CoA ligase
Organic acid-CoA ligase {ECO:0000313|EMBL:BAO29412.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
anamox1_curated_scaffold_620_15
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14924..15856)
DNA (933bp) protein (311aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000366A214
hydrolase
Putative hydrolase protein {ECO:0000313|EMBL:ABM95726.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_620_16
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15998..17011
DNA (1014bp) protein (338aa)
Peptidase U32 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z6_LEPCP
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ACB33738.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_620_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17033..17986
DNA (954bp) protein (318aa)
Peptidase U32 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z7_LEPCP
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ACB33739.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_620_18
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18013..18453
DNA (441bp) protein (147aa)
Sterol-binding domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z8_LEPCP
sterol-binding domain-containing protein
Sterol-binding domain protein {ECO:0000313|EMBL:ACB33740.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_620_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18497..19036
DNA (540bp) protein (180aa)
putative diamine acetyltransferase (EC:2.3.1.57)
Acetyltransferase N-acetyltransferase, spermidine/spermine acetyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNB0_9BURK
Acetyltransferase N-acetyltransferase, spermidine/spermine acetyltransferase {ECO:0000313|EMBL:EGJ09828.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_620_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19049..20617)
DNA (1569bp) protein (523aa)
methyl-accepting chemotaxis protein Tax=Acidovorax sp. MR-S7 RepID=UPI0003728A62
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAD23817.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
methyl-accepting chemotaxis sensory transducer
anamox1_curated_scaffold_620_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20623..21741)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQA6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95193.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_620_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21836..23569
DNA (1734bp) protein (578aa)
acsA; acetyl-coenzyme A synthetase AcsA (EC:6.2.1.1)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000371DC64
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGJ09830.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_620_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23578..24072
DNA (495bp) protein (165aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQB0_RUBGI
hypothetical protein
anamox1_curated_scaffold_620_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24186..24800)
DNA (615bp) protein (205aa)
Binding-protein-dependent transport systems inner membrane component Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LWP8_DESBD
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
anamox1_curated_scaffold_620_25
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25122..25409)
DNA (288bp) protein (96aa)
Family 1 extracellular solute-binding protein Tax=Alcaligenes RepID=M5IW25_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERT56082.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
extracellular solute-binding protein, family 1
anamox1_curated_scaffold_620_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25406..26653)
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI0002F45ED2
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_620_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26715..27593)
DNA (879bp) protein (293aa)
PHP domain protein Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0L8_ALIDB
php domain-containing protein
Php domain-containing protein {ECO:0000313|EMBL:GAO24668.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
anamox1_curated_scaffold_620_28
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27631..28329)
DNA (699bp) protein (233aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Putative lipoprotein releasing system ATP-binding ABC transporter Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJG2_METPP
lipoprotein releasing system ATP-binding ABC transporter
anamox1_curated_scaffold_620_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28322..29578)
DNA (1257bp) protein (419aa)
Lipoprotein ABC transporter permease LolC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR61_RUBGI
lolC; lipoprotein ABC transporter permease LolC
Lipoprotein ABC transporter permease LolC {ECO:0000313|EMBL:BAL95498.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 1-30 of 46 in total

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