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anamox1_curated_scaffold_551

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_551_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

412..3033
DNA (2622bp) protein (874aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
Superfamily I DNA and RNA helicases Tax=Burkholderia thailandensis RepID=Q2SYL0_BURTA
ATP-dependent DNA helicase UvrD/PcrA
anamox1_curated_scaffold_551_2
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3036..6062
DNA (3027bp) protein (1009aa)
DNA methylase, putative Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV20_9GAMM
Putative DNA methylase {ECO:0000313|EMBL:AIA54537.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
putative DNA methylase
anamox1_curated_scaffold_551_3
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6069..9230
DNA (3162bp) protein (1054aa)
Type III restriction enzyme, res subunit Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV21_9GAMM
Type III restriction-modification enzyme, helicase subunit {ECO:0000313|EMBL:AIA54538.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
Type III restriction-modification enzyme, helicase subunit
anamox1_curated_scaffold_551_4
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9245..10456)
DNA (1212bp) protein (404aa)
Phage-related integrase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMI7_METPP
phage-related integrase
Phage-related integrase {ECO:0000313|EMBL:ABM96776.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_551_5
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..12039)
DNA (1398bp) protein (466aa)
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
tRNA modification GTPase MnmE Tax=Methylibium RepID=MNME_METPP
trmE; tRNA modification GTPase TrmE
anamox1_curated_scaffold_551_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12294..13952)
DNA (1659bp) protein (553aa)
Membrane protein insertase YidC Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP90_9BURK
yidC; protein translocase subunit YidC
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_551_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13949..14314)
DNA (366bp) protein (122aa)
Putative membrane protein insertion efficiency factor Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYF0_RUBGI
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_551_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14329..14811)
DNA (483bp) protein (161aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribosomal protein S5 domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYF1_RUBGI
ribosomal protein S5 domain protein
anamox1_curated_scaffold_551_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14833..14973)
DNA (141bp) protein (47aa)
50S ribosomal protein L34 Tax=Comamonadaceae RepID=RL34_ACIAC
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
anamox1_curated_scaffold_551_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15322..16800
DNA (1479bp) protein (493aa)
Chromosomal replication initiator protein DnaA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK09_RUBGI
dnaA; chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_551_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17080..18189
DNA (1110bp) protein (370aa)
dnaN; DNA polymerase III beta subunit DnaN (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA polymerase III subunit beta Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK10_RUBGI
anamox1_curated_scaffold_551_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18272..20767
DNA (2496bp) protein (832aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
gyrB; DNA gyrase subunit B GyrB (EC:5.99.1.3)
DNA gyrase subunit B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM54_9BURK
anamox1_curated_scaffold_551_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21143..21412
DNA (270bp) protein (90aa)
Putative transcriptional regulator, CopG/Arc/MetJ family Tax=Thiomonas intermedia (strain K12) RepID=D5X1D6_THIK1
CopG/Arc/MetJ family transcriptional regulator
Putative transcriptional regulator, CopG/Arc/MetJ family {ECO:0000313|EMBL:ADG30932.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
anamox1_curated_scaffold_551_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21399..21767
DNA (369bp) protein (123aa)
Plasmid stabilization system Tax=Thiomonas intermedia (strain K12) RepID=D5X1D7_THIK1
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ADG30933.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
anamox1_curated_scaffold_551_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22158..23030
DNA (873bp) protein (291aa)
Inner-membrane translocator Tax=Acidovorax sp. NO-1 RepID=H0C073_9BURK
Inner-membrane translocator {ECO:0000313|EMBL:EHL21989.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
putative high-affinity branched-chain amino acid ABC transporter, permease protein
anamox1_curated_scaffold_551_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23031..23972
DNA (942bp) protein (314aa)
branched-chain amino acid ABC transporter permease Tax=Variovorax paradoxus RepID=UPI00036DDF0E
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EJL76037.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
inner-membrane translocator
anamox1_curated_scaffold_551_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23969..24724
DNA (756bp) protein (252aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS36_9BURK
putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EHR72354.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_551_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24721..25434
DNA (714bp) protein (238aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Variovorax sp. CF313 RepID=J2KCL7_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL70923.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ABC transporter
anamox1_curated_scaffold_551_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25595..25810)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8Y8_HALP7
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_551_20
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

comp(25798..26118)
DNA (321bp) protein (107aa)
Stackhouse genomic scaffold, scaffold_160 Tax=Chondrus crispus RepID=R7Q7G6_CHOCR
Stackhouse genomic scaffold, scaffold_160 {ECO:0000313|EMBL:CDF34467.1}; species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;"
hypothetical protein
anamox1_curated_scaffold_551_21
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26172..26474
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVY7_9BURK
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EGI76090.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
antibiotic biosynthesis monooxygenase
anamox1_curated_scaffold_551_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26490..27962
DNA (1473bp) protein (491aa)
Peptidase M20 Tax=Burkholderia cepacia GG4 RepID=J7JBG9_BURCE
peptidase M20
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_551_23
Aphanomyces astaci, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

28002..29162
DNA (1161bp) protein (387aa)
Cystathionine gamma-synthase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TRU0_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:ETV88978.1}; species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces astaci.;"
metB; cystathionine gamma-synthase
anamox1_curated_scaffold_551_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29299..30600
DNA (1302bp) protein (434aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
OAH/OAS sulfhydrylase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJP9_9BURK
OAH/OAS sulfhydrylase {ECO:0000313|EMBL:EHR70404.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_551_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30658..31161
DNA (504bp) protein (168aa)
GAF sensor protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ45_9GAMM
Diguanylate cyclase {ECO:0000313|EMBL:GAN45887.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
diguanylate cyclase
anamox1_curated_scaffold_551_26
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31336..33186)
DNA (1851bp) protein (617aa)
AMP-dependent synthetase and ligase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QHF3_DESB2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADK84996.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
anamox1_curated_scaffold_551_27
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33373..34431
DNA (1059bp) protein (353aa)
Amino acid or sugar ABC transport system, permease protein Tax=delta proteobacterium NaphS2 RepID=D8F1B1_9DELT
Amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:EFK10427.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
inner-membrane translocator
anamox1_curated_scaffold_551_28
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34441..35328
DNA (888bp) protein (296aa)
Amino acid or sugar ABC transport system, permease protein Tax=delta proteobacterium NaphS2 RepID=D8F1B2_9DELT
inner-membrane translocator
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox1_curated_scaffold_551_29
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35347..36528
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F1B3_9DELT
extracellular ligand-binding receptor
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox1_curated_scaffold_551_30
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36540..37319
DNA (780bp) protein (260aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CBM7_DESTA
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:AFM26968.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Displaying items 1-30 of 57 in total

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