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anamox1_curated_scaffold_871

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_871_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1706
DNA (1704bp) protein (568aa)
Translation initiation factor IF-2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT26_RUBGI
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_871_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1799..2194
DNA (396bp) protein (132aa)
Ribosome-binding factor A Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT25_RUBGI
rbfA; ribosome-binding factor A RbfA
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_871_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2219..3178
DNA (960bp) protein (320aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA pseudouridine synthase B Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT24_RUBGI
anamox1_curated_scaffold_871_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3185..5014
DNA (1830bp) protein (610aa)
GTP-binding protein Tax=Caldimonas manganoxidans RepID=UPI00036E060A
GTP-binding protein TypA {ECO:0000313|EMBL:EGJ12493.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
typA; GTP-binding protein TypA
anamox1_curated_scaffold_871_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5926
DNA (903bp) protein (301aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVX4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12492.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative transmembrane protein
anamox1_curated_scaffold_871_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6002..7807
DNA (1806bp) protein (602aa)
diacylglycerol O-acyltransferase (EC:2.3.1.20)
Acyltransferase, WS/DGAT/MGAT Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNB2_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_871_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7917..9260
DNA (1344bp) protein (448aa)
glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4)
glutamate dehydrogenase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E1BCBF
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
anamox1_curated_scaffold_871_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(9365..11101)
DNA (1737bp) protein (579aa)
Putative uncharacterized protein Tax=Chloroflexus RepID=A9WEN1_CHLAA
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_871_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11328..12290
DNA (963bp) protein (321aa)
tRNA-dihydrouridine synthase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XY95_LEPCP
tRNA-dihydrouridine synthase A
TIM-barrel protein, yjbN family {ECO:0000313|EMBL:ACB33996.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_871_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12287..13165
DNA (879bp) protein (293aa)
mtaP; methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
S-methyl-5'-thioadenosine phosphorylase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSJ0_RUBGI
anamox1_curated_scaffold_871_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13162..14250
DNA (1089bp) protein (363aa)
mtnA; putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase MtnA (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Methylthioribose-1-phosphate isomerase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSI9_RUBGI
anamox1_curated_scaffold_871_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14247..14921
DNA (675bp) protein (225aa)
Class II aldolase/adducin Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPW6_9BURK
aldolase
Class II aldolase/adducin {ECO:0000313|EMBL:EGJ10384.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_871_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14923..15840)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10382.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative transmembrane protein
anamox1_curated_scaffold_871_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16330..17646
DNA (1317bp) protein (439aa)
Isocitrate lyase {ECO:0000313|EMBL:EIK90910.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EIK90910.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Isocitrate lyase Tax=Hydrogenophaga sp. PBC RepID=I4MNX0_9BURK
isocitrate lyase
anamox1_curated_scaffold_871_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17743..19380
DNA (1638bp) protein (546aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR76_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95513.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_871_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19445..21064
DNA (1620bp) protein (540aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABM96008.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABM96008.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Gamma-glutamyltransferase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKB9_METPP
anamox1_curated_scaffold_871_17
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21126..21914
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ETY80342.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ETY80342.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
Glucose/ribitol dehydrogenase family protein Tax=Burkholderia terrae BS001 RepID=I5CGT6_9BURK
short chain dehydrogenase family protein
anamox1_curated_scaffold_871_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22011..22967)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11971.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative transmembrane protein
anamox1_curated_scaffold_871_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22922..23284)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUF4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11972.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_871_20
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23331..24326
DNA (996bp) protein (332aa)
qor; putative quinone oxidoreductase Qor (EC:1.6.5.5)
Alcohol dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUF5_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_871_21
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24323..25906
DNA (1584bp) protein (528aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI0003801311
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ACA88015.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
anamox1_curated_scaffold_871_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25882..26640)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000378864E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_871_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26650..27525)
DNA (876bp) protein (292aa)
galU; UTP-glucose-1-phosphate uridylyltransferase GalU (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
UTP-glucose-1-phosphate uridylyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ91_9BURK
anamox1_curated_scaffold_871_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27610..28587
DNA (978bp) protein (326aa)
phosphoglycerate dehydrogenase-like protein (EC:1.1.1.95)
Phosphoglycerate dehydrogenase-like oxidoreductase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHW6_9BURK
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EHR70579.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_871_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28529..31372)
DNA (2844bp) protein (948aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
valS; valyl-tRNA synthetase ValS (EC:6.1.1.9)
Valine--tRNA ligase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUP8_RUBGI
anamox1_curated_scaffold_871_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31522..32499)
DNA (978bp) protein (326aa)
guaC; GMP reductase GuaC (EC:1.7.1.7)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
GMP reductase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUP5_RUBGI
anamox1_curated_scaffold_871_27
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32597..34504
DNA (1908bp) protein (636aa)
Two component histidine kinase Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FXZ2_9DELT
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
anamox1_curated_scaffold_871_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34514..36808
DNA (2295bp) protein (765aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
uvrD; DNA helicase II UvrD (EC:3.6.4.12)
ATP-dependent DNA helicase UvrD Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ98_9BURK
anamox1_curated_scaffold_871_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36792..37619)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ99_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10517.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_871_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37636..38604)
DNA (969bp) protein (323aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
thrB; homoserine kinase ThrB (EC:2.7.1.39)
Homoserine kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQA0_9BURK
Displaying items 1-30 of 49 in total

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