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anamox1_curated_scaffold_831

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_831_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..865
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP71_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10139.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mtrB; outer membrane protein MtrB/PioB
anamox1_curated_scaffold_831_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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868..1527
DNA (660bp) protein (220aa)
Cytochrome c4 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR24_RUBGI
cytochrome c4
Cytochrome c4 {ECO:0000313|EMBL:BAL95461.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1556..2290
DNA (735bp) protein (245aa)
Cytochrome c4 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR23_RUBGI
cytochrome c4
Cytochrome c4 {ECO:0000313|EMBL:BAL95460.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2346..4940)
DNA (2595bp) protein (865aa)
clpB; ATP-dependent Clp protease ATP-binding subunit ClpB (EC:3.4.21.-)
ATP-dependent Clp protease ATP-binding subunit ClpB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA5_RUBGI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5007..5522)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW35_9BURK
flavin reductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_831_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5519..6046)
DNA (528bp) protein (176aa)
molybdenum cofactor biosynthesis protein MoaE Tax=Ideonella sp. B508-1 RepID=UPI0003B62B16
molybdopterin biosynthesis MoaE
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_831_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6209..6463)
DNA (255bp) protein (85aa)
Molybdopterin synthase subunit MoaD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA8_RUBGI
moaD; molybdopterin synthase subunit MoaD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_831_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6460..7704)
DNA (1245bp) protein (415aa)
Molybdopterin biosynthesis protein MoeA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUA9_RUBGI
moeA; molybdopterin biosynthesis protein MoeA
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:BAL96596.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7720..9129)
DNA (1410bp) protein (470aa)
Threonine synthase {ECO:0000313|EMBL:EGJ12549.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EGJ12549.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
thrC; threonine synthase ThrC (EC:4.2.3.1)
Threonine synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW31_9BURK
anamox1_curated_scaffold_831_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9126..10460)
DNA (1335bp) protein (445aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW30_9BURK
anamox1_curated_scaffold_831_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10536..11768)
DNA (1233bp) protein (411aa)
Aminotransferase AlaT {ECO:0000313|EMBL:EGJ12547.1}; EC=2.6.1.2 {ECO:0000313|EMBL:EGJ12547.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Aminotransferase AlaT Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW29_9BURK
aminotransferase
anamox1_curated_scaffold_831_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..12259
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LW28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12546.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_831_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12383..12859
DNA (477bp) protein (159aa)
Putative bacterioferritin comigratory oxidoreductase protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG11_METPP
bacterioferritin comigratory oxidoreductase
Putative bacterioferritin comigratory oxidoreductase protein {ECO:0000313|EMBL:ABM94500.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_831_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12976..14610
DNA (1635bp) protein (545aa)
PhoH family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUB5_RUBGI
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:BAL96602.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14653..16578)
DNA (1926bp) protein (642aa)
prpE; propionate--CoA ligase PrpE (EC:6.2.1.17)
Propionate--CoA ligase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA5_9BURK
Propionate--CoA ligase {ECO:0000313|EMBL:EHR71318.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_831_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16843..17475
DNA (633bp) protein (211aa)
Putative C40 family peptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUB9_RUBGI
putative C40 family peptidase
Putative C40 family peptidase {ECO:0000313|EMBL:BAL96606.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17517..18656
DNA (1140bp) protein (380aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Cyclic pyranopterin monophosphate synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA3_9BURK
moaA; molybdenum cofactor biosynthesis protein A
anamox1_curated_scaffold_831_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18680..21760)
DNA (3081bp) protein (1027aa)
Acriflavin resistance protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX5_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EGJ11093.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transporter, AcrB/D/F family protein
anamox1_curated_scaffold_831_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..23050)
DNA (1227bp) protein (409aa)
RND family efflux transporter, MFP subunit Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA0_9BURK
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EHR71313.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
multidrug efflux transporter
anamox1_curated_scaffold_831_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23164..23601)
DNA (438bp) protein (146aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRX7_9BURK
anamox1_curated_scaffold_831_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23598..24365)
DNA (768bp) protein (256aa)
Putative methyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC6_RUBGI
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL96613.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_831_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24391..25161
DNA (771bp) protein (257aa)
gloB; hydroxyacylglutathione hydrolase GloB (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Hydroxyacylglutathione hydrolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC7_RUBGI
anamox1_curated_scaffold_831_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25158..26846
DNA (1689bp) protein (563aa)
Membrane-bound lytic murein transglycosylase D MltD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUC8_RUBGI
mltD; membrane-bound lytic murein transglycosylase D MltD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_831_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26897..27220)
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY Tax=Ideonella sp. B508-1 RepID=UPI000348CF11
iron-sulfur cluster assembly protein IscA
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_831_25
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27240..28427)
DNA (1188bp) protein (396aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
cysteine desulfurase Tax=Caldimonas manganoxidans RepID=UPI00037E0E00
iscS; cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme
anamox1_curated_scaffold_831_26
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28424..28957)
DNA (534bp) protein (178aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI30_METPP
BadM/Rrf2 family transcriptional regulator
HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EWS55757.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
anamox1_curated_scaffold_831_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29119..29667)
DNA (549bp) protein (183aa)
ptpA; putative protein-tyrosine phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS47_9BURK
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EGJ11165.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_831_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29664..31655)
DNA (1992bp) protein (664aa)
UvrABC system protein B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS46_9BURK
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
uvrB; UvrABC system protein B
Displaying 28 items

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