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anamox1_curated_scaffold_1705

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1705_1
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39..1004)
DNA (966bp) protein (322aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJR8_9BURK
alpha/beta hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1705_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1062..4661
DNA (3600bp) protein (1200aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
dnaE; DNA polymerase III alpha subunit DnaE (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN51_9BURK
anamox1_curated_scaffold_1705_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4705..5958
DNA (1254bp) protein (418aa)
Putative esterase of the alpha-beta hydrolase superfamily Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJS2_9BURK
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EHR70630.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
patatin
anamox1_curated_scaffold_1705_4
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5998..6390)
DNA (393bp) protein (131aa)
DNA polymerase III, alpha subunit Tax=Polaromonas sp. CF318 RepID=J2KT09_9BURK
DNA polymerase III, alpha subunit {ECO:0000313|EMBL:EJL83235.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
anamox1_curated_scaffold_1705_5
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6642..8267
DNA (1626bp) protein (542aa)
Membrane-associated, metal-dependent hydrolase protein Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IX23_HERSS
membrane-associated, metal-dependent hydrolase
Membrane-associated, metal-dependent hydrolase protein {ECO:0000313|EMBL:ADJ66060.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
anamox1_curated_scaffold_1705_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8329..8979
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2M5_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1705_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8997..9950
DNA (954bp) protein (318aa)
Lipopolysaccharide heptosyltransferase I Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2M4_LEPCP
lipopolysaccharide heptosyltransferase I
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1705_8
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9995..10528)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Pseudomonas chlororaphis subsp. aureofaciens 30-84 RepID=J2YGT6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJL06104.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;"
hypothetical protein
anamox1_curated_scaffold_1705_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10539..10736)
DNA (198bp) protein (66aa)
Potassium efflux system protein Tax=Variovorax paradoxus (strain EPS) RepID=E6V0L1_VARPE
potassium efflux system protein
Potassium efflux system protein {ECO:0000313|EMBL:ADU36712.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
anamox1_curated_scaffold_1705_10
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10764..11033)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Serratia plymuthica PRI-2C RepID=I3AL24_SERPL
Uncharacterized protein {ECO:0000313|EMBL:EIJ19817.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica PRI-2C.;"
hypothetical protein
anamox1_curated_scaffold_1705_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11041..11817)
DNA (777bp) protein (259aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4Y175_ALCXX
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases
Dehydrogenase {ECO:0000313|EMBL:AHC46876.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
anamox1_curated_scaffold_1705_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11930..12832
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family Tax=Variovorax paradoxus (strain S110) RepID=C5CKK4_VARPS
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS19158.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
anamox1_curated_scaffold_1705_13
Vibrio rumoiensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12868..14397)
DNA (1530bp) protein (510aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio rumoiensis.;"
catalase Tax=Brachymonas chironomi RepID=UPI0003703CA7
catalase
anamox1_curated_scaffold_1705_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14553..15704)
DNA (1152bp) protein (384aa)
Putative N-acetylglucosaminyl transferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJT1_9BURK
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TPR repeat protein
anamox1_curated_scaffold_1705_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15737..16102)
DNA (366bp) protein (122aa)
Uncharacterized integral membrane protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJT2_9BURK
Uncharacterized integral membrane protein {ECO:0000313|EMBL:EHR70640.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1705_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16164..16481)
DNA (318bp) protein (106aa)
Integration host factor subunit beta Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNZ0_RUBGI
ihfB; integration host factor subunit beta IhfB
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1705_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16554..17918)
DNA (1365bp) protein (455aa)
30S ribosomal protein S1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUC3_9BURK
30S ribosomal protein S1 {ECO:0000313|EMBL:EGJ11941.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rpsA; 30S ribosomal protein S1
Displaying 17 items

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