name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
anamox1_curated_scaffold_733_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2..1024
----------------- DNA (1023bp) protein (341aa) |
Putative serine protein kinase, PrkA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK71_RUBGI
prkA; putative serine protein kinase PrkA
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:BAL93408.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1035..2324
----------------- DNA (1290bp) protein (430aa) |
UPF0229 protein RGE_00640 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK72_RUBGI
hypothetical protein
UPF0229 protein RGE_00640 {ECO:0000256|HAMAP-Rule:MF_01232}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2348..3904
----------------- DNA (1557bp) protein (519aa) |
SpoVR family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK73_RUBGI
SpoVR family protein
SpoVR family protein {ECO:0000313|EMBL:BAL93410.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
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Not on your lists |
comp(4014..4898)
----------------- DNA (885bp) protein (295aa) |
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036B6969
PEP motif putative anchor domain protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:AHG87798.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
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anamox1_curated_scaffold_733_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5514..6929)
----------------- DNA (1416bp) protein (472aa) |
D-lactate dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI0003800EA0
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EHR68960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dld; D-lactate dehydrogenase (cytochrome)
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anamox1_curated_scaffold_733_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7075..7650
----------------- DNA (576bp) protein (192aa) |
ATP:cob(I)alamin adenosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT28_9BURK
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHR68962.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ATP--cobalamin adenosyltransferase
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anamox1_curated_scaffold_733_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7682..8803)
----------------- DNA (1122bp) protein (374aa) |
aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK76_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_733_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9023..10249)
----------------- DNA (1227bp) protein (409aa) |
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase {ECO:0000313|EMBL:EGJ09677.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EGJ09677.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Threonine dehydratase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMV9_9BURK
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anamox1_curated_scaffold_733_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10246..11712)
----------------- DNA (1467bp) protein (489aa) |
peptidase C69 Tax=Caldimonas manganoxidans RepID=UPI000370DCD8
tldD; protein TldD
Protein TldD {ECO:0000313|EMBL:BAL93415.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
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Not on your lists |
11915..12262
----------------- DNA (348bp) protein (116aa) |
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
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anamox1_curated_scaffold_733_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12223..13110)
----------------- DNA (888bp) protein (296aa) |
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Putative S-adenosylmethionine-dependent methyltransferase, YraL family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT99_9BURK
tetrapyrrole methylase family protein
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anamox1_curated_scaffold_733_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13187..13573
----------------- DNA (387bp) protein (129aa) |
hypothetical protein Tax=Ideonella sp. B508-1 RepID=UPI00034BBB7D
hypothetical protein
UPF0102 protein RGE_00730 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13648..14190
----------------- DNA (543bp) protein (181aa) |
gmhA; phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTA1_9BURK
Phosphoheptose isomerase {ECO:0000313|EMBL:EHR68974.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
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anamox1_curated_scaffold_733_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14187..14810
----------------- DNA (624bp) protein (208aa) |
Transport protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW4_9BURK
Transport protein {ECO:0000313|EMBL:EGJ09682.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transport-associated protein
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anamox1_curated_scaffold_733_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14844..15752)
----------------- DNA (909bp) protein (303aa) |
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTA3_9BURK
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EHR68976.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
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anamox1_curated_scaffold_733_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15776..16978)
----------------- DNA (1203bp) protein (401aa) |
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW6_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ09684.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilU; twitching motility protein PilU
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anamox1_curated_scaffold_733_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16986..18035)
----------------- DNA (1050bp) protein (350aa) |
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW8_9BURK
pilT; twitching motility protein PilT
Twitching motility protein {ECO:0000313|EMBL:EGJ09686.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
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anamox1_curated_scaffold_733_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18104..18799
----------------- DNA (696bp) protein (232aa) |
Alanine racemase domain protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW9_9BURK
Alanine racemase domain protein {ECO:0000313|EMBL:EGJ09687.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
alanine racemase domain-containing protein
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anamox1_curated_scaffold_733_19
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18828..19316)
----------------- DNA (489bp) protein (163aa) |
Leucine-responsive transcriptional regulator Lrp Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK90_RUBGI
lrp; leucine-responsive transcriptional regulator Lrp
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_733_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19338..20216)
----------------- DNA (879bp) protein (293aa) |
Thioredoxin Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMX3_9BURK
Thioredoxin {ECO:0000313|EMBL:EGJ09691.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
thioredoxin domain-containing protein
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anamox1_curated_scaffold_733_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20269..21543)
----------------- DNA (1275bp) protein (425aa) |
gdhA; glutamate dehydrogenase (EC:1.4.1.-)
Glutamate dehydrogenase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK95_RUBGI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
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anamox1_curated_scaffold_733_22
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21636..22445
----------------- DNA (810bp) protein (270aa) |
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
proC; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY9_9BURK
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anamox1_curated_scaffold_733_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22865..24499
----------------- DNA (1635bp) protein (545aa) |
Peptide chain release factor 3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY1_9BURK
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
prfC; peptide chain release factor RF-3 PrfC
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anamox1_curated_scaffold_733_24
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24574..24840
----------------- DNA (267bp) protein (89aa) |
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
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anamox1_curated_scaffold_733_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24821..25303
----------------- DNA (483bp) protein (161aa) |
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00036DDBC9
PIN domain-containing protein
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anamox1_curated_scaffold_733_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25346..26254
----------------- DNA (909bp) protein (303aa) |
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTB7_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_733_27
unknown
|
Not on your lists |
comp(26431..26604)
----------------- DNA (174bp) protein (58aa) |
This feature has no annotations |
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anamox1_curated_scaffold_733_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27026..27253
----------------- DNA (228bp) protein (76aa) |
TRAP transporter solute receptor, TAXI family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE2_9BURK
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EHR71762.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TRAP transporter solute receptor, TAXI family protein 1
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anamox1_curated_scaffold_733_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27351..29540
----------------- DNA (2190bp) protein (730aa) |
TRAP transporter, 4TM/12TM fusion protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE1_9BURK
TRAP transporter, 4TM/12TM fusion family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
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anamox1_curated_scaffold_733_30
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
29556..30179
----------------- DNA (624bp) protein (208aa) |
FMN-binding negative transcriptional regulator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y573_LEPCP
FMN-binding negative transcriptional regulator
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:ACB32303.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
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