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anamox1_curated_scaffold_3183

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3183_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..559
DNA (558bp) protein (186aa)
60 kDa chaperonin Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXB8_RUBGI
groEL; 60 kDa chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_3183_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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722..2386
DNA (1665bp) protein (555aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMI9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ09557.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_3183_3
unknown

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comp(2453..3262)
DNA (810bp) protein (270aa)

This feature has no annotations

anamox1_curated_scaffold_3183_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3537..6434)
DNA (2898bp) protein (966aa)
TPR repeat:Tetratricopeptide TPR_4 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EP2_DECAR
hypothetical protein
TPR repeat:Tetratricopeptide TPR_4 {ECO:0000313|EMBL:AAZ46689.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
anamox1_curated_scaffold_3183_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6575..7297)
DNA (723bp) protein (241aa)
Probable GTP-binding protein EngB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXC0_RUBGI
engB; ribosome biogenesis GTP-binding protein EngB
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_3183_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7353..7976
DNA (624bp) protein (208aa)
cytochrome C Tax=Ideonella sp. B508-1 RepID=UPI0003B40160
cytochrome c4
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_3183_7
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8130..9116
DNA (987bp) protein (329aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
sulfoxide reductase catalytic subunit YedY Tax=Acidovorax sp. MR-S7 RepID=UPI00037C9A79
TMAO/DMSO reductase
anamox1_curated_scaffold_3183_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9180..9845
DNA (666bp) protein (222aa)
Sulfoxide reductase heme-binding subunit YedZ Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXC3_RUBGI
ferric reductase-like transmembrane protein
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_3183_9
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9842..10549
DNA (708bp) protein (236aa)
Putative ABC transporter periplasmic molybdate-binding protein Tax=Hydrogenophaga sp. PBC RepID=I4MHP8_9BURK
ABC-type molybdate transport system, periplasmic component
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
anamox1_curated_scaffold_3183_10
Thauera aromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10582..11043)
DNA (462bp) protein (154aa)
Putative transcriptional regulatory protein for hcr operon Tax=Thauera aromatica RepID=HCRR_THAAR
Putative transcriptional regulatory protein for hcr operon; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aromatica.;"
transcriptional regulator
anamox1_curated_scaffold_3183_11
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11091..12086)
DNA (996bp) protein (332aa)
4-hydroxybenzoyl-CoA reductase beta subunit Tax=Magnetospirillum sp. SO-1 RepID=M3AES8_9PROT
Periplasmic aromatic aldehyde oxidoreductase FAD binding subunit YagS 4-hydroxybenzoyl-CoA reductase beta subunit {ECO:0000313|EMBL:KIL98519.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
4-hydroxybenzoyl-CoA reductase subunit beta
anamox1_curated_scaffold_3183_12
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12083..13663)
DNA (1581bp) protein (527aa)
4-hydroxybenzoyl-CoA reductase subunit alpha Tax=Thauera phenylacetica B4P RepID=N6ZQW5_9RHOO
4-hydroxybenzoyl-CoA reductase subunit alpha {ECO:0000313|EMBL:ENO96743.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
4-hydroxybenzoyl-CoA reductase subunit alpha
Displaying 12 items

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