ggKbase home page

anamox1_curated_scaffold_774

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_774_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152..1177)
DNA (1026bp) protein (342aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNC9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09847.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_774_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1170..1766)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LND0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09848.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_774_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2024..3241
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Delftia acidovorans CCUG 274B RepID=S2XUN5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43229.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
anamox1_curated_scaffold_774_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3553..4149
DNA (597bp) protein (199aa)
thioredoxin Tax=Ideonella sp. B508-1 RepID=UPI0003B6AAA3
thioredoxin-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_774_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4166..4663)
DNA (498bp) protein (166aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Dihydrofolate reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT95_9BURK
anamox1_curated_scaffold_774_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..5494)
DNA (822bp) protein (274aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
thymidylate synthase (EC:2.1.1.45)
thymidylate synthase Tax=Acidovorax sp. MR-S7 RepID=UPI00036FC371
anamox1_curated_scaffold_774_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5515..7329)
DNA (1815bp) protein (605aa)
ABC transporter-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT91_9BURK
ABC transporter-like protein {ECO:0000313|EMBL:EGJ11559.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter permease/ATP-binding protein
anamox1_curated_scaffold_774_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7578..8432
DNA (855bp) protein (285aa)
Diguanylate cyclase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP57_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL94794.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_774_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8454..9593)
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT23_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11491.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_774_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9590..12115)
DNA (2526bp) protein (842aa)
ABC transporter permease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT22_9BURK
ABC transporter permease {ECO:0000313|EMBL:EGJ11490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative ABC transporter permease
anamox1_curated_scaffold_774_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12112..12795)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP60_RUBGI
ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_774_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12807..13769)
DNA (963bp) protein (321aa)
miaA; tRNA dimethylallyltransferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA dimethylallyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP61_RUBGI
anamox1_curated_scaffold_774_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13803..15020)
DNA (1218bp) protein (406aa)
Bcr/CflA subfamily drug resistance transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT19_9BURK
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:EGJ11487.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Bcr/CflA family multidrug resistance transporter
anamox1_curated_scaffold_774_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15004..15720)
DNA (717bp) protein (239aa)
rluF; ribosomal large subunit pseudouridine synthase F RluF (EC:4.2.1.70 5.4.99.-)
RNA-binding S4 domain-containing protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT18_9BURK
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:EGJ11486.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_774_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15900..16508)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPN5_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_774_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16505..16723)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPN6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10304.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_774_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16731..17534)
DNA (804bp) protein (268aa)
Putative integral membrane protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN50_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EHR71090.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_774_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17561..18673)
DNA (1113bp) protein (371aa)
selU; tRNA 2-selenouridine synthase (EC:2.9.1.-)
tRNA 2-selenouridine synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN53_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_774_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18698..21343)
DNA (2646bp) protein (882aa)
glnD; UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT6_RUBGI
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_774_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21358..22227)
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
map; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPP0_9BURK
anamox1_curated_scaffold_774_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..26287
DNA (3966bp) protein (1322aa)
purL; phosphoribosylformylglycinamidine synthase PurL (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphoribosylformylglycinamidine synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT8_RUBGI
anamox1_curated_scaffold_774_22
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26446..26925)
DNA (480bp) protein (160aa)
Phosphatase-like protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHV8_METPP
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:EWS57853.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
phosphatase-like protein
anamox1_curated_scaffold_774_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26933..27940)
DNA (1008bp) protein (336aa)
Import inner membrane translocase subunit Tim44 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPP3_9BURK
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:EGJ10311.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_774_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28148..28642
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKI2_ACCPU
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
anamox1_curated_scaffold_774_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28659..29471)
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRU2_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95729.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_774_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29595..30128
DNA (534bp) protein (178aa)
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Peptide methionine sulfoxide reductase MsrA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRU7_RUBGI
anamox1_curated_scaffold_774_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30167..31000)
DNA (834bp) protein (278aa)
alpha/beta hydrolase Tax=Ideonella sp. B508-1 RepID=UPI000344CF5F
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EHR72500.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
alpha/beta hydrolase
anamox1_curated_scaffold_774_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31120..33765)
DNA (2646bp) protein (882aa)
DNA mismatch repair protein MutS Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS23_9BURK
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mutS; DNA mismatch repair protein MutS
anamox1_curated_scaffold_774_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33871..34392
DNA (522bp) protein (174aa)
Ferritin, Dps family protein Tax=Acidovorax RepID=A1W305_ACISJ
Ferritin, Dps family protein
Ferritin, Dps family protein {ECO:0000313|EMBL:ABM40630.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox1_curated_scaffold_774_30
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34389..34604
DNA (216bp) protein (72aa)
haloacid dehalogenase Tax=Thiobacillus denitrificans RepID=UPI00035EC2A4
P-type HAD superfamily ATPase {ECO:0000313|EMBL:EHI11741.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
P-type ATPase, translocating
Displaying items 1-30 of 31 in total

View Taxonomy