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anamox1_curated_scaffold_1085

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1085_1
Chlorocebus sabaeus, Chlorocebus, Primates, Mammalia, Chordata, Metazoa

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3098..3856
DNA (759bp) protein (253aa)
PREDICTED: LOW QUALITY PROTEIN: TRIO and F-actin-binding protein Tax=Felis catus RepID=UPI0002989CDC
Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAP00000003299}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus.;" source="Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus).;"
anamox1_curated_scaffold_1085_2
unknown

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4440..4568
DNA (129bp) protein (43aa)

This feature has no annotations

anamox1_curated_scaffold_1085_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7191..7481)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
CRISPR-associated endoribonuclease Cas2 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4I3_LEPCP
CRISPR-associated Cas2 family protein
anamox1_curated_scaffold_1085_4
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7491..8519)
DNA (1029bp) protein (343aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
CRISPR-associated endonuclease Cas1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4I4_LEPCP
CRISPR-associated Cas1 family protein
anamox1_curated_scaffold_1085_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8534..9166)
DNA (633bp) protein (211aa)
CRISPR-associated Cas4 family protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPD1_9BURK
CRISPR-associated Cas4 family protein {ECO:0000313|EMBL:EGJ10199.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
CRISPR-associated Cas4 family protein
anamox1_curated_scaffold_1085_6
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9163..9540)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036B30DA
uncharacterized protein conserved in bacteria
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAO81048.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_7
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9537..9776)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QU43_9ZZZZ
uncharacterized conserved protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAO81049.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_8
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9781..10758)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00037CFDAA
uncharacterized protein predicted to be involved in DNA repair
Uncharacterized protein predicted to be involved in DNA repair {ECO:0000313|EMBL:BAO81242.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_9
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10760..12616)
DNA (1857bp) protein (619aa)
CRISPR-associated protein, Csd1 family protein Tax=mine drainage metagenome RepID=E6PND2_9ZZZZ
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:BAO81243.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_10
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12613..13308)
DNA (696bp) protein (232aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00037EA670
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81244.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_11
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13340..15730)
DNA (2391bp) protein (797aa)
DEAD/DEAH box helicase domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4J1_LEPCP
predicted helicase
Predicted helicase {ECO:0000313|EMBL:BAO81245.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
anamox1_curated_scaffold_1085_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15928..17457
DNA (1530bp) protein (510aa)
gshA2; glutamate--cysteine ligase GshA (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutamate--cysteine ligase Tax=Variovorax paradoxus RepID=UPI0003764BDD
anamox1_curated_scaffold_1085_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17592..18827
DNA (1236bp) protein (412aa)
Candidate 2-oxoisovalerate dehydrogenase, alpha subunit Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0B1_RAMTT
bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha
Candidate 2-oxoisovalerate dehydrogenase, alpha subunit {ECO:0000313|EMBL:AEG92133.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_1085_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18832..19908
DNA (1077bp) protein (359aa)
Candidate 2-oxoisovalerate dehydrogenase, beta subunit Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0B2_RAMTT
bkdA2; 2-oxoisovalerate dehydrogenase subunit beta
Candidate 2-oxoisovalerate dehydrogenase, beta subunit {ECO:0000313|EMBL:AEG92134.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_1085_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19908..21191
DNA (1284bp) protein (428aa)
bkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12)
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex E2 {ECO:0000313|EMBL:CAP43852.1}; EC=2.3.1.12 {ECO:0000313|EMBL:CAP43852.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex E2 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HYM9_BORPD
anamox1_curated_scaffold_1085_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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21210..22613
DNA (1404bp) protein (468aa)
lpdV; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase Tax=Burkholderia cenocepacia RepID=B4EEF2_BURCJ
Tax=CG_Rhodocyc_01
anamox1_curated_scaffold_1085_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22832..24820
DNA (1989bp) protein (663aa)
Uncharacterized protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VQV5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89596.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative multicopper oxidase
anamox1_curated_scaffold_1085_18
unknown

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comp(24987..25157)
DNA (171bp) protein (57aa)

This feature has no annotations

anamox1_curated_scaffold_1085_19
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(25211..26005)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z5H8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89678.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
anamox1_curated_scaffold_1085_20
unknown

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comp(26195..26782)
DNA (588bp) protein (196aa)

This feature has no annotations

Displaying 20 items

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