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anamox1_curated_scaffold_260

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_260_1
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..638
DNA (636bp) protein (212aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSP3_RUBGI
anamox1_curated_scaffold_260_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

635..1132
DNA (498bp) protein (166aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SG44_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_260_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1157..2482)
DNA (1326bp) protein (442aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ompB; osmolarity sensor protein OmpB (EC:2.7.13.3)
Putative oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLW4_9BURK
anamox1_curated_scaffold_260_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2514..3248)
DNA (735bp) protein (245aa)
Osmolarity response regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLW3_9BURK
Osmolarity response regulator {ECO:0000313|EMBL:EGJ09331.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ompR; DNA-binding response regulator OmpR
anamox1_curated_scaffold_260_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3411..4148
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSN9_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96026.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_260_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4176..4946)
DNA (771bp) protein (257aa)
bdhA; 3-hydroxybutyrate dehydrogenase BdhA (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase Tax=Ideonella sp. B508-1 RepID=UPI000345347E
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_260_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5008..5883
DNA (876bp) protein (292aa)
alpha/beta hydrolase Tax=Ideonella sp. B508-1 RepID=UPI0003B4F8B8
hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_260_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5902..8184
DNA (2283bp) protein (761aa)
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
GTP pyrophosphokinase RelA {ECO:0000313|EMBL:BAL96023.1}; EC=2.7.6.5 {ECO:0000313|EMBL:BAL96023.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
GTP pyrophosphokinase RelA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSN6_RUBGI
anamox1_curated_scaffold_260_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8537..9418
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLL5_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93902.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_260_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9412..9891
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLL6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93903.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_260_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9888..11153
DNA (1266bp) protein (422aa)
N-glycosyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKS7_9BURK
N-glycosyltransferase {ECO:0000313|EMBL:EGJ08945.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
N-glycosyltransferase
anamox1_curated_scaffold_260_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11150..12925
DNA (1776bp) protein (592aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKS8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ08946.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_260_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13023..13577
DNA (555bp) protein (185aa)
Polyhydroxyalkanoate synthesis repressor PhaR Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK43_9BURK
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EHR71358.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
polyhydroxyalkonate synthesis repressor PhaR
anamox1_curated_scaffold_260_14
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13574..15010
DNA (1437bp) protein (479aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
ribosomal protein S12 methylthiotransferase Tax=Caldimonas manganoxidans RepID=UPI0003773DDF
rimO; 30S ribosomal protein S12 methylthiotransferase
anamox1_curated_scaffold_260_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15045..16208
DNA (1164bp) protein (388aa)
metC; cystathionine beta-lyase MetC (EC:4.4.1.8)
Cystathionine beta-lyase MetC {ECO:0000313|EMBL:BAL96443.1}; EC=4.4.1.8 {ECO:0000313|EMBL:BAL96443.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Cystathionine beta-lyase MetC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTV6_RUBGI
anamox1_curated_scaffold_260_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16238..16708)
DNA (471bp) protein (157aa)
SsrA-binding protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTC0_9BURK
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
smpB; SsrA-binding protein SmpB
anamox1_curated_scaffold_260_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16756..17208
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTV2_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96439.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_260_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17195..17563
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIL6_9BURK
UPF0125 protein BurJ1DRAFT_3576 {ECO:0000256|HAMAP-Rule:MF_00460}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_260_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17675..18286)
DNA (612bp) protein (204aa)
thrH; phosphoserine--homoserine phosphotransferase ThrH (EC:3.1.3.3)
Phosphoserine phosphatase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSD0_9BURK
Phosphoserine phosphatase {ECO:0000313|EMBL:EGJ11248.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_260_20
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18421..18894)
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7L4_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB36162.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_260_21
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18891..20210)
DNA (1320bp) protein (440aa)
TRAP dicarboxylate transporter, DctM subunit Tax=Caenispirillum salinarum AK4 RepID=K9H6W8_9PROT
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EKV32809.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
TRAP dicarboxylate transporter, DctM subunit
anamox1_curated_scaffold_260_22
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..20734)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9GRM6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AKH20118.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
anamox1_curated_scaffold_260_23
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20731..21759)
DNA (1029bp) protein (343aa)
TRAP dicarboxylate transporter-DctP subunit Tax=Caenispirillum salinarum AK4 RepID=K9HLV8_9PROT
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:EKV31333.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
TRAP dicarboxylate transporter, DctP subunit
anamox1_curated_scaffold_260_trna_1
unknown

Not on your lists

comp(21972..22058)
DNA (87bp)
transferRNA Ser
anamox1_curated_scaffold_260_24
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22081..22893)
DNA (813bp) protein (271aa)
apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH (EC:3.6.1.41)
Symmetrical bis(5'-nucleosyl)-tetraphosphatase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ47_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_260_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..24262
DNA (1302bp) protein (434aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSU4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11412.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_260_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24259..25011
DNA (753bp) protein (251aa)
peptidase Tax=Ideonella sp. B508-1 RepID=UPI00034D6B93
SapC family protein {ECO:0000313|EMBL:EGJ11411.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_260_27
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25056..25607)
DNA (552bp) protein (184aa)
Transcriptional regulator Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQU1_9BURK
MarR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_260_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25591..26346)
DNA (756bp) protein (252aa)
ABC transporter-related protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y356_LEPCP
ABC transporter-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_260_29
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26346..28106)
DNA (1761bp) protein (587aa)
ABC-type branched-chain amino acid transport system, ATPase component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQU4_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EHR72724.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ABC transporter-like protein
Displaying items 1-30 of 79 in total

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