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anamox1_curated_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_233_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..873
-----------------
DNA (873bp)
protein (291aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQP2_9BURK
anamox1_curated_scaffold_233_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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863..1384
-----------------
DNA (522bp)
protein (174aa)
Outer membrane related peptidoglycan-associated lipoprotein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SBX5_METPP
outer membrane related peptidoglycan-associated lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_233_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1409..2461)
-----------------
DNA (1053bp)
protein (351aa)
L-asparaginase II Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTK1_9BURK
L-asparaginase II {ECO:0000313|EMBL:EGJ11669.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
L-asparaginase, thermolabile family protein
anamox1_curated_scaffold_233_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2555..3241
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
anamox1_curated_scaffold_233_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3273..3713)
-----------------
DNA (441bp)
protein (147aa)
Universal stress protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLK4_METPP
Universal stress protein family protein {ECO:0000313|EMBL:EWS59474.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
universal stress protein
anamox1_curated_scaffold_233_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3910..4746)
-----------------
DNA (837bp)
protein (279aa)
Putative transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTK6_9BURK
Putative transferase {ECO:0000313|EMBL:EGJ11674.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
peptidase C26 family protein
anamox1_curated_scaffold_233_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4874..6544
-----------------
DNA (1671bp)
protein (557aa)
Na/Pi-cotransporter Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP19_9BURK
Na/Pi-cotransporter {ECO:0000313|EMBL:EHR73227.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Na/Pi-cotransporter II-like protein
anamox1_curated_scaffold_233_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6563..7429
-----------------
DNA (867bp)
protein (289aa)
Putative membrane protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP20_9BURK
Putative membrane protein {ECO:0000313|EMBL:EHR73228.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_233_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7529..8380)
-----------------
DNA (852bp)
protein (284aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQH1_9BURK
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_233_10
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8545..9261
-----------------
DNA (717bp)
protein (239aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase Tax=Polaromonas sp. CF318 RepID=J2UIN7_9BURK
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL91307.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
anamox1_curated_scaffold_233_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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9369..9755
-----------------
DNA (387bp)
protein (129aa)
Putative Endoribonuclease L-PSP, YjgF-like Tax=Candidatus Nitrospira defluvii RepID=D8P9C9_9BACT
endoribonuclease L-PSP
Putative Endoribonuclease L-PSP, YjgF-like {ECO:0000313|EMBL:CBK39838.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox1_curated_scaffold_233_12
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9752..10885
-----------------
DNA (1134bp)
protein (378aa)
UPI0003D3B4AF related cluster Tax=unknown RepID=UPI0003D3B4AF
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_233_13
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

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11063..12415
-----------------
DNA (1353bp)
protein (451aa)
TldD protein Tax=Luminiphilus syltensis NOR5-1B RepID=B8KX68_9GAMM
TldD protein {ECO:0000313|EMBL:EED35832.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
protease
anamox1_curated_scaffold_233_14
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12429..13724
-----------------
DNA (1296bp)
protein (432aa)
TldD/PmbA family protein Tax=Luminiphilus syltensis NOR5-1B RepID=B8KX67_9GAMM
TldD/PmbA family protein {ECO:0000313|EMBL:EED36304.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
TldD/PmbA family protein
anamox1_curated_scaffold_233_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13792..16797
-----------------
DNA (3006bp)
protein (1002aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:BAL95492.1}; EC=2.7.13.3 {ECO:0000313|EMBL:BAL95492.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PAS/PAC sensor hybrid histidine kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR55_RUBGI
anamox1_curated_scaffold_233_16
unknown

Not on your lists

17230..17568
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

anamox1_curated_scaffold_233_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17565..18173
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DIU6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62398.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
anamox1_curated_scaffold_233_18
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..21319)
-----------------
DNA (3216bp)
protein (1072aa)
Similar to ATP dependent transcriptional activator bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transcriptional activator
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
anamox1_curated_scaffold_233_19
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21423..22709)
-----------------
DNA (1287bp)
protein (429aa)
TRAP dicarboxylate transporter, DctM subunit Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRI4_PUSST
TRAP dicarboxylate transporter subunit DctM
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_233_20
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22706..23311)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRI5_PUSST
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_233_21
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23332..24336)
-----------------
DNA (1005bp)
protein (335aa)
C4-dicarboxylate-binding periplasmic protein, putative Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRI6_PUSST
C4-dicarboxylate-binding periplasmic protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_233_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24411..25649)
-----------------
DNA (1239bp)
protein (413aa)
Putative acyl-CoA transferase/carnitine dehydratase Tax=Polaromonas sp. CF318 RepID=J2TWC5_9BURK
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
anamox1_curated_scaffold_233_23
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25773..26663)
-----------------
DNA (891bp)
protein (297aa)
Thiol-disulfide isomerase-like thioredoxin Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQM7_9BURK
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACB35804.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_233_24
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26721..27131)
-----------------
DNA (411bp)
protein (137aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U7_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34660.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_233_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27229..27798)
-----------------
DNA (570bp)
protein (190aa)
Conserved hypothetical ATP binding protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U6_LEPCP
ATP-binding protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_233_26
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27887..28699)
-----------------
DNA (813bp)
protein (271aa)
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_233_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28757..29137)
-----------------
DNA (381bp)
protein (127aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4U8_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34661.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_233_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29340..30908)
-----------------
DNA (1569bp)
protein (523aa)
hutH; histidine ammonia-lyase HutH (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Histidine ammonia-lyase Tax=Rubrivivax RepID=I0HVW1_RUBGI
anamox1_curated_scaffold_233_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(30908..32629)
-----------------
DNA (1722bp)
protein (574aa)
hutU; urocanate hydratase HutU (EC:4.2.1.49)
Urocanate hydratase Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG71_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_233_30
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32702..33418
-----------------
DNA (717bp)
protein (239aa)
GntR family transcriptional regulator Tax=Ideonella sp. B508-1 RepID=UPI00034B0736
hutC; transcriptional regulator, histidine utilization repressor, GntR family HutC
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying items 1-30 of 71 in total

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