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anamox1_curated_scaffold_333

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_333_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1034
DNA (1032bp) protein (344aa)
nitrate reductase A subunit beta Tax=Methyloversatilis universalis RepID=UPI00037CDE5D
nitrate reductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_333_2
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1037..1771
DNA (735bp) protein (245aa)
Respiratory nitrate reductase chaperone NarJ Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122R6_POLSJ
respiratory nitrate reductase chaperone NarJ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
anamox1_curated_scaffold_333_3
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1768..2508
DNA (741bp) protein (247aa)
Respiratory nitrate reductase 1 gamma chain {ECO:0000313|EMBL:KFB69438.1}; EC=1.7.99.4 {ECO:0000313|EMBL:KFB69438.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
respiratory nitrate reductase subunit gamma (EC:1.7.99.4)
Respiratory nitrate reductase gamma subunit Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGH6_METPP
anamox1_curated_scaffold_333_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..3305
DNA (777bp) protein (259aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q6Z8_ACIAP
PpiC-type peptidyl-prolyl cis-trans isomerase
anamox1_curated_scaffold_333_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3389..4561
DNA (1173bp) protein (391aa)
hipO; Hippurate hydrolase (EC:3.5.1.32)
Peptidase M20D, amidohydrolase Tax=Oceanibaculum indicum P24 RepID=K2IPU7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_333_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4598..5269)
DNA (672bp) protein (224aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Octanoyltransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX29_LEPCP
lipoate-protein ligase B
anamox1_curated_scaffold_333_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5292..6641)
DNA (1350bp) protein (450aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BN9_POLSJ
fumarate reductase/succinate dehydrogenase flavoprotein-like protein
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein {ECO:0000313|EMBL:ABE44053.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
anamox1_curated_scaffold_333_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6638..7630)
DNA (993bp) protein (331aa)
extracytoplasmic binding receptor Tax=Variovorax paradoxus RepID=UPI000375FB70
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS17020.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
anamox1_curated_scaffold_333_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7735..8904)
DNA (1170bp) protein (390aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR04_9BURK
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EHR73302.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_333_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9067..9645
DNA (579bp) protein (193aa)
rubA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Holliday junction ATP-dependent DNA helicase RuvA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXM1_RUBGI
anamox1_curated_scaffold_333_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9670..10476)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00038106AB
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_333_12
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10552..11025)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXM2_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28268.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
anamox1_curated_scaffold_333_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11665..12723
DNA (1059bp) protein (353aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Methylibium petroleiphilum (strain PM1) RepID=RUVB_METPP
anamox1_curated_scaffold_333_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12924..13499
DNA (576bp) protein (192aa)
Putative pilus assambly protein Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4W6_XANCT
Tfp pilus assembly protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
anamox1_curated_scaffold_333_15
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13511..13969
DNA (459bp) protein (153aa)
prepilin Tax=Xanthomonas RepID=UPI00034949AC
Prepilin {ECO:0000313|EMBL:KGE51860.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. vasculorum.;"
type IV pilus modification protein PilV
anamox1_curated_scaffold_333_16
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13984..14967
DNA (984bp) protein (328aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI000372AD5B
Uncharacterized protein {ECO:0000313|EMBL:EGK72435.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
anamox1_curated_scaffold_333_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14964..15494
DNA (531bp) protein (177aa)
PilX protein Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LXG9_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFN47879.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
pilX; Tfp pilus assembly protein PilX
anamox1_curated_scaffold_333_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15518..18637
DNA (3120bp) protein (1040aa)
fimbrial assembly protein Tax=Methylohalobius crimeensis RepID=UPI0003B6679F
von Willebrand factor type A domain protein {ECO:0000313|EMBL:KFJ11730.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
pilY1B; putative Tfp pilus assembly protein
anamox1_curated_scaffold_333_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18634..19077
DNA (444bp) protein (148aa)
Putative pseudopilin PulG Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRE0_THIA3
putative pseudopilin PulG
Putative pseudopilin PulG {ECO:0000313|EMBL:CAZ87181.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
anamox1_curated_scaffold_333_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19108..19782)
DNA (675bp) protein (225aa)
gpmB; putative phosphoglycerate mutase GpmB (EC:5.4.2.1)
Phosphoglycerate mutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU93_9BURK
Phosphoglycerate mutase {ECO:0000313|EMBL:EGJ11911.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_333_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19788..20138)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU95_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11913.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_333_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20222..22333)
DNA (2112bp) protein (704aa)
Diguanylate cyclase/phosphodiesterase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU96_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_333_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22377..23699)
DNA (1323bp) protein (441aa)
Putative HD-GYP hydrolase domain containing protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXN5_RUBGI
putative HD-GYP hydrolase domain containing protein
Putative HD-GYP hydrolase domain containing protein {ECO:0000313|EMBL:BAL97772.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_333_24
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23896..25110
DNA (1215bp) protein (405aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9)
Beta-ketoadipyl CoA thiolase Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222S0_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
anamox1_curated_scaffold_333_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25111..25761)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family Tax=Rubrivivax gelatinosus S1 RepID=L8BAH6_RUBGE
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCF78734.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
LuxR family two component transcriptional regulator
anamox1_curated_scaffold_333_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25811..27658)
DNA (1848bp) protein (616aa)
Periplasmic sensor signal transduction histidine kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXL9_RUBGI
sensor signal transduction histidine kinase
Periplasmic sensor signal transduction histidine kinase {ECO:0000313|EMBL:BAL97756.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_333_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27821..28924
DNA (1104bp) protein (368aa)
Putative phoH-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU81_9BURK
Putative phoH-like protein {ECO:0000313|EMBL:EGJ11899.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_333_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28921..29361
DNA (441bp) protein (147aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Endoribonuclease YbeY Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU80_9BURK
putative rRNA maturation factor
anamox1_curated_scaffold_333_29
unknown

Not on your lists

29358..29450
DNA (93bp) protein (31aa)

This feature has no annotations

anamox1_curated_scaffold_333_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29405..29680)
DNA (276bp) protein (92aa)
UPF0250 protein RBXJA2T_16237 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU70_9BURK
UPF0250 protein RBXJA2T_16237 {ECO:0000256|HAMAP-Rule:MF_00659}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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