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anamox1_curated_scaffold_196

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_196_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2666)
DNA (2664bp) protein (888aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SE76_METPP
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:KDB54064.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
anamox1_curated_scaffold_196_2
unknown

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comp(2793..3068)
DNA (276bp) protein (92aa)

This feature has no annotations

anamox1_curated_scaffold_196_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3121..3897
DNA (777bp) protein (259aa)
coaX; type III pantothenate kinase CoaX (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Type III pantothenate kinase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH4_RUBGI
anamox1_curated_scaffold_196_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3913..5286)
DNA (1374bp) protein (458aa)
ATP-dependent protease ATPase subunit HslU Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH3_RUBGI
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_196_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5283..5819)
DNA (537bp) protein (179aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hslV; ATP-dependent protease subunit HslV (EC:3.4.25.-)
ATP-dependent protease subunit HslV Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU58_9BURK
anamox1_curated_scaffold_196_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5887..7725)
DNA (1839bp) protein (613aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXH1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97708.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_196_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7847..8551)
DNA (705bp) protein (235aa)
RNA polymerase-binding transcription factor DksA Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN0_9BURK
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
dksA; putative DnaK suppressor protein DksA
anamox1_curated_scaffold_196_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8688..9731)
DNA (1044bp) protein (348aa)
Putative GTPase, G3E family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU61_9BURK
Putative GTPase, G3E family {ECO:0000313|EMBL:EHR69383.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cobalamin synthesis protein P47K
anamox1_curated_scaffold_196_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9854..10741
DNA (888bp) protein (296aa)
Transport protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN2_9BURK
Transport protein {ECO:0000313|EMBL:EGJ09250.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
corC; magnesium and cobalt efflux protein CorC
anamox1_curated_scaffold_196_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10741..12303
DNA (1563bp) protein (521aa)
lnt; apolipoprotein N-acyltransferase Lnt (EC:2.3.1.-)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Apolipoprotein N-acyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG7_RUBGI
anamox1_curated_scaffold_196_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12324..13199)
DNA (876bp) protein (292aa)
Na(+) dependent transporter,Sodium Bile acid symporter family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08S57_STIAD
Na(+) dependent transporter,Sodium Bile acid symporter family protein {ECO:0000313|EMBL:KFE72020.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
bile acid:sodium symporter
anamox1_curated_scaffold_196_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13284..14225
DNA (942bp) protein (314aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Glycine--tRNA ligase alpha subunit Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLL0_AZOSU
glycyl-tRNA synthetase, tetrameric type, alpha subunit
anamox1_curated_scaffold_196_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14229..16367
DNA (2139bp) protein (713aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glyS; glycyl-tRNA synthetase beta subunit GlyS (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLN5_9BURK
anamox1_curated_scaffold_196_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16367..17002
DNA (636bp) protein (212aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase GmhB {ECO:0000313|EMBL:BAL97701.1}; EC=3.1.3.- {ECO:0000313|EMBL:BAL97701.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
D,D-heptose 1,7-bisphosphate phosphatase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG4_RUBGI
anamox1_curated_scaffold_196_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17044..17931
DNA (888bp) protein (296aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003804F14
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_196_16
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18023..19201
DNA (1179bp) protein (393aa)
Candidate Isovaleryl-CoA dehydrogenase Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW71_RAMTT
Isovaleryl-CoA dehydrogenase
Candidate Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEG91641.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_196_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19254..19940
DNA (687bp) protein (229aa)
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU69_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_196_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20249..21427
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLP4_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_196_19
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21424..22074
DNA (651bp) protein (217aa)
lysine transporter LysE Tax=Ideonella sp. B508-1 RepID=UPI0003456457
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ACB36457.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_196_20
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22082..23185
DNA (1104bp) protein (368aa)
C4-dicarboxylate transporter/malic acid transport protein Tax=Acidovorax delafieldii 2AN RepID=C5T4S9_ACIDE
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EER60528.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
tellurite resistance protein-like permease
anamox1_curated_scaffold_196_21
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23182..25092
DNA (1911bp) protein (637aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
Putative nitrate/nitrite sensor protein narQ Tax=Methyloversatilis universalis FAM5 RepID=F5RDJ5_9RHOO
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
anamox1_curated_scaffold_196_22
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25089..25763
DNA (675bp) protein (225aa)
XRE family transcriptional regulator Tax=Methyloversatilis universalis RepID=UPI000371003A
Nitrate/nitrite response regulator protein {ECO:0000313|EMBL:EGK70975.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
two component LuxR family transcriptional regulator
anamox1_curated_scaffold_196_23
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25859..27130
DNA (1272bp) protein (424aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI000374B1DF
FHA domain containing protein {ECO:0000313|EMBL:AET93666.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
FHA domain protein
anamox1_curated_scaffold_196_24
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27140..27940
DNA (801bp) protein (267aa)
Serine/threonine protein phosphatase Tax=Burkholderia RepID=J2R9I2_9BURK
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:ETY81626.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
protein serine/threonine phosphatase
anamox1_curated_scaffold_196_25
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27952..28833)
DNA (882bp) protein (294aa)
Ribosomal RNA large subunit methyltransferase J Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ4_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_196_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29184..31064
DNA (1881bp) protein (627aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pckG; phosphoenolpyruvate carboxykinase [GTP] PckG (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ7_9BURK
anamox1_curated_scaffold_196_27
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31104..31340)
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI00752.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
anamox1_curated_scaffold_196_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31510..32286
DNA (777bp) protein (259aa)
phosphoesterase Tax=Ideonella sp. B508-1 RepID=UPI0003479D30
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EGJ09716.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative metallophosphoesterase
anamox1_curated_scaffold_196_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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32389..32811
DNA (423bp) protein (141aa)
universal stress protein UspA Tax=Ideonella sp. B508-1 RepID=UPI000345A9DB
UspA domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_196_30
unknown

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comp(32822..33022)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying items 1-30 of 73 in total

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