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anamox1_curated_scaffold_1060

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1060_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2012
DNA (2010bp) protein (670aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUW2_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1060_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2079..3200
DNA (1122bp) protein (374aa)
membrane-bound lytic murein transglycosylase B (EC:3.2.1.-)
Lytic murein transglycosylase B Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMA1_9BURK
Lytic murein transglycosylase B {ECO:0000313|EMBL:EGJ09469.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1060_3
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3217..3615
DNA (399bp) protein (133aa)
lactoylglutathione lyase (EC:4.4.1.5)
Lactoylglutathione lyase {ECO:0000313|EMBL:EWS59108.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EWS59108.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Lactoylglutathione lyase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJY9_METPP
anamox1_curated_scaffold_1060_4
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3665..4219
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Polaromonas sp. CF318 RepID=J2L5H8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80483.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
anamox1_curated_scaffold_1060_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4242..4829
DNA (588bp) protein (196aa)
Uncharacterized protein involved in cation transport Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLD2_9BURK
Uncharacterized protein involved in cation transport {ECO:0000313|EMBL:EHR70453.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_1060_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4830..5438)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUV1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96788.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1060_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5611..6246
DNA (636bp) protein (212aa)
pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase PdxH (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUV2_RUBGI
anamox1_curated_scaffold_1060_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6266..7153)
DNA (888bp) protein (296aa)
Putative neutral zinc metallopeptidase Tax=Variovorax paradoxus B4 RepID=T1XFJ0_VARPD
putative neutral zinc metallopeptidase
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:AGU51074.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_1060_9
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7189..7758)
DNA (570bp) protein (190aa)
dcd; deoxycytidine triphosphate deaminase Dcd (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=Hylemonella gracilis ATCC 19624 RepID=F3KSR1_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
anamox1_curated_scaffold_1060_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7916..8455
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUX4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12142.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1060_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8459..8854)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Hydrogenophaga sp. PBC RepID=I4MK53_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89593.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
anamox1_curated_scaffold_1060_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8996..10543
DNA (1548bp) protein (516aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
FAD dependent oxidoreductase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1L7_LEPCP
glpD; glycerol-3-phosphate dehydrogenase
anamox1_curated_scaffold_1060_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10577..11005)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Brachymonas chironomi RepID=UPI00037604C0
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycine cleavage system H protein
anamox1_curated_scaffold_1060_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11166..13091)
DNA (1926bp) protein (642aa)
Selenocysteine-specific translation elongation factor Tax=Hydrogenophaga sp. PBC RepID=I4MK55_9BURK
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EIK89595.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
selenocysteine-specific translation elongation factor
anamox1_curated_scaffold_1060_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13088..14542)
DNA (1455bp) protein (485aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
selA; L-seryl-tRNA(Ser) selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=Hydrogenophaga sp. PBC RepID=I4MK57_9BURK
anamox1_curated_scaffold_1060_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14577..15656)
DNA (1080bp) protein (360aa)
Protein FdhE homolog Tax=Hydrogenophaga sp. PBC RepID=I4MK58_9BURK
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase accessory protein
anamox1_curated_scaffold_1060_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15672..16292)
DNA (621bp) protein (207aa)
Formate dehydrogenase, gamma subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK59_9BURK
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EIK89599.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase subunit gamma
anamox1_curated_scaffold_1060_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16292..17167)
DNA (876bp) protein (292aa)
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:EIK89600.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EIK89600.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fdxH; formate dehydrogenase, beta subunit (EC:1.2.1.2)
Formate dehydrogenase, iron-sulfur subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK60_9BURK
anamox1_curated_scaffold_1060_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17171..19615)
DNA (2445bp) protein (815aa)
Formate dehydrogenase, alpha subunit Tax=Hydrogenophaga sp. PBC RepID=I4MK61_9BURK
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EIK89601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
formate dehydrogenase subunit alpha
anamox1_curated_scaffold_1060_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19664..20251)
DNA (588bp) protein (196aa)
Twin-arginine translocation pathway signal Tax=Hydrogenophaga sp. PBC RepID=I4MK62_9BURK
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EIK89602.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
twin-arginine translocation pathway signal
anamox1_curated_scaffold_1060_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20410..21051)
DNA (642bp) protein (214aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Molybdenum cofactor guanylyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJI4_9BURK
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA
anamox1_curated_scaffold_1060_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21044..21979)
DNA (936bp) protein (312aa)
Uncharacterized protein required for formate dehydrogenase activity Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJH9_9BURK
Uncharacterized protein required for formate dehydrogenase activity {ECO:0000313|EMBL:EHR70200.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
formate dehydrogenase family accessory protein FdhD
anamox1_curated_scaffold_1060_23
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22295..23656
DNA (1362bp) protein (454aa)
beta alanine--pyruvate transaminase (EC:2.6.1.18)
beta alanine--pyruvate aminotransferase Tax=Acidovorax sp. MR-S7 RepID=UPI00036E3F12
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
anamox1_curated_scaffold_1060_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23669..24709)
DNA (1041bp) protein (347aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WV71_9BURK
Threonine aldolase {ECO:0000313|EMBL:EHR72278.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1060_25
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24778..25281)
DNA (504bp) protein (168aa)
tripartite tricarboxylate transporter TctA Tax=Herbaspirillum sp. JC206 RepID=UPI0002EEC414
Tricarboxylate transport membrane protein TctA
Tax=CG_Rhodof_03
Displaying 25 items

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